ENST00000582787.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000582787.1

Source

Gencode19

Same with

lnc-SP6-2:1

Classification

intergenic

Length

496 nt

Genomic location

chr17-:45968621..45973178

Exon number

3

Exons

45968621..45968947,45971266..45971324,45973069..45973178

Genome context

Sequence
000001 GCCCCAGAAA TAGCATATAC ATTGCGCCCT AAGTCCAGTC TCGCCCAGGT GTGGCAGGAG CTTTTACCTG CTCTTCGGCA 000080
000081 GTAGCCGGCT GCCACTCAAC CCCATGCCTG ACTGAGCTGT GGTAGAAGGA TTGAGGCCAG CACAGAGGAG GATCAGCAGG 000160
000161 AAATGTAAGG GTTGTCCTCA TCTAATCCGT CAGTACCAGA CAGTGAACAT CTCTCCCCCA GGATGCTGAG GGAGGGTCCT 000240
000241 GGAGGGAAGG ATGTGGAACT ACAGCCTCTG CTCTCAAGAA GCTCAGATCT GGGCAGGGAA CATCACATAC CAGGGCTGTC 000320
000321 TGTCGGGGGG GTGGAGGGCT GGGGGAGGGA TAGCATTAGG GGAAATACCT AATGTAAATG ACAAGTTGAT GGGTGCAGCA 000400
000401 AACCAACATG GCACATGTAT ACCTATGTAA CAAATCTGCA TGTTGTGCAC GTGTACCCTA GAACTTAAAG TATAATTAAA 000480
000481 AAAAAAAAAA GCTTCA
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Predicted Small Protein

Name ENST00000582787.1_smProtein_407:460
Length 18
Molecular weight 1866.2589
Aromaticity 0.0588235294118
Instability index 58.3470588235
Isoelectric point 8.65679931641
Runs 5
Runs residual 0.00735294117647
Runs probability 0.0103868574457
Amino acid sequence MAHVYLCNKSACCARVP
Secondary structure LLEEEELLLLHHHLLLL
PRMN -
PiMo -