ENST00000585243.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000585243.1 |
Source |
Gencode19 |
Same with |
lnc-C17orf48-5:2 |
Classification |
intergenic |
Length |
756 nt |
Genomic location |
chr17+:10781510..10784212 |
Exon number |
2 |
Exons |
10781510..10781841,10783789..10784212 |
Genome context |
|
Sequence |
000001 GTGTCACAAA GTGAATAATG CATTTTCTTA GCAGCTAGTT CCAGAATCCC GGTCCAACAA GGAGATTGCC TCTGTCCAAG 000080
000081 AAAATATCTT GATAAGCTGC TCAGGGCAGA AGGTGAGAGA CCCTGAAGGC ATGGGTGTCC AGTGAAATGA ATTGTTTATT 000160 000161 TTTTCCTCAC AATGCAGGAA AGAGACAAAG GAGATAGAAG AAGTGGAATA AGGGGAAAGA TAAGAACTGG AAAGCTGAAC 000240 000241 CATAGCCCAG ACCCAAGCAG GAGAAAGAGC AAGAAATGCC TATGAGAAAG CCGGAAAGAA ACCCCTGGAA TTTGGAAGAA 000320 000321 AATGTCTAAA AGGGAATGGC AAGGAACCTG AGGAACCAGC GTGAGGAAAA CCTGGATGAT CTGACGTCTT CCTCACTTTA 000400 000401 TCCCTACCTG TCCACGCCTC CATCCATCCA CCCATCCATC ACTGATCAAG CTCTCACTAT GTCTATAGTG TAGAAGGTGC 000480 000481 CACCAAATGC AATGGAACCT CTTGTCTCAT GTGTCTACTT GCATCTTTAA GTTGATACAC GGAAGGCACA GTCCAAGCAC 000560 000561 AGGATACTGG AAGCTATGGA GGTACAGTGG CCTCTGAGCA AACTGAAAAC TCTCTATCAC TAAAGGGTTG GGCATACAGG 000640 000641 GTATCTCCTC TGCTCTGCCA CCTACCTTGA GGATGCTTTA CATGTGGCTA AAAGTGGAGG CAGAGATATT TGGATAAATA 000720 000721 AATGCTAGAG AATTGGAAAT TCCTAGGACA AGTCAA |
Predicted Small Protein
Name | ENST00000585243.1_smProtein_335:472 |
Length | 46 |
Molecular weight | 5076.6292 |
Aromaticity | 0.0444444444444 |
Instability index | 61.9755555556 |
Isoelectric point | 4.82635498047 |
Runs | 6 |
Runs residual | 0.0289141414141 |
Runs probability | 0.0478125184009 |
Amino acid sequence | MARNLRNQREENLDDLTSSSLYPYLSTPPSIHPSITDQALTMSIV |
Secondary structure | LLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHEEEL |
PRMN | - |
PiMo | - |