ENST00000585243.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000585243.1

Source

Gencode19

Same with

lnc-C17orf48-5:2

Classification

intergenic

Length

756 nt

Genomic location

chr17+:10781510..10784212

Exon number

2

Exons

10781510..10781841,10783789..10784212

Genome context

Sequence
000001 GTGTCACAAA GTGAATAATG CATTTTCTTA GCAGCTAGTT CCAGAATCCC GGTCCAACAA GGAGATTGCC TCTGTCCAAG 000080
000081 AAAATATCTT GATAAGCTGC TCAGGGCAGA AGGTGAGAGA CCCTGAAGGC ATGGGTGTCC AGTGAAATGA ATTGTTTATT 000160
000161 TTTTCCTCAC AATGCAGGAA AGAGACAAAG GAGATAGAAG AAGTGGAATA AGGGGAAAGA TAAGAACTGG AAAGCTGAAC 000240
000241 CATAGCCCAG ACCCAAGCAG GAGAAAGAGC AAGAAATGCC TATGAGAAAG CCGGAAAGAA ACCCCTGGAA TTTGGAAGAA 000320
000321 AATGTCTAAA AGGGAATGGC AAGGAACCTG AGGAACCAGC GTGAGGAAAA CCTGGATGAT CTGACGTCTT CCTCACTTTA 000400
000401 TCCCTACCTG TCCACGCCTC CATCCATCCA CCCATCCATC ACTGATCAAG CTCTCACTAT GTCTATAGTG TAGAAGGTGC 000480
000481 CACCAAATGC AATGGAACCT CTTGTCTCAT GTGTCTACTT GCATCTTTAA GTTGATACAC GGAAGGCACA GTCCAAGCAC 000560
000561 AGGATACTGG AAGCTATGGA GGTACAGTGG CCTCTGAGCA AACTGAAAAC TCTCTATCAC TAAAGGGTTG GGCATACAGG 000640
000641 GTATCTCCTC TGCTCTGCCA CCTACCTTGA GGATGCTTTA CATGTGGCTA AAAGTGGAGG CAGAGATATT TGGATAAATA 000720
000721 AATGCTAGAG AATTGGAAAT TCCTAGGACA AGTCAA
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Predicted Small Protein

Name ENST00000585243.1_smProtein_335:472
Length 46
Molecular weight 5076.6292
Aromaticity 0.0444444444444
Instability index 61.9755555556
Isoelectric point 4.82635498047
Runs 6
Runs residual 0.0289141414141
Runs probability 0.0478125184009
Amino acid sequence MARNLRNQREENLDDLTSSSLYPYLSTPPSIHPSITDQALTMSIV
Secondary structure LLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHEEEL
PRMN -
PiMo -