ENST00000585330.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000585330.1

Source

Gencode19

Same with

NONHSAT005122

Classification

intergenic

Length

463 nt

Genomic location

chr1+:110954799..110958896

Exon number

3

Exons

110954799..110954915,110956774..110956853,110958631..110958896

Genome context

Sequence
000001 AGTGTCTTCA TCTCTGCATC CCTAGTGCAA CAGAGCATGA CAAAAATTCA ACAAATATTT ATTGAAGAGT CTTGATGTCT 000080
000081 TTTGGGAAAG GAACTCTATG GTTACCTTTA CTCTAAGTTA AAAACAACAA CAACAACAAC AAAAACACAA AACCCTGAGG 000160
000161 CTCAGAAGAT AAATATTTGC TGAAGATCAC TGTGCTTATT AGATGGGTGT TACTGATTCT TACCTCAGAG AAGAGAATGT 000240
000241 CATGGAGACA AAATGACCTG CTTAGAGTTC TGCACCCCCC AGCATGGAGA GCAGAGCGCA AAGATTTCTT CCGGACTCCC 000320
000321 ACATTCCCCT TGGAATCCAA GAACTGGTCT ACTGTCACAA CACTTTAGTA CCCTCTTGTA AGCCTGTGGA CAAATCCTCT 000400
000401 GATGCCTTGA TACCTCGGTT TTCCCCCACT ATAAATGGGA AGATAAATTC ACTAGAAACA GTA
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Predicted Small Protein

Name ENST00000585330.1_smProtein_236:367
Length 44
Molecular weight 5229.93
Aromaticity 0.139534883721
Instability index 42.9209302326
Isoelectric point 10.7805786133
Runs 7
Runs residual 0.0054873268879
Runs probability 0.0399348928761
Amino acid sequence MSWRQNDLLRVLHPPAWRAERKDFFRTPTFPLESKNWSTVTTL
Secondary structure LLLLLLHHHHHLLLLHHHHHHHHLLLLLLLLLLLLLLEEELLL
PRMN -
PiMo -