ENST00000585330.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000585330.1 |
Source |
Gencode19 |
Same with |
NONHSAT005122 |
Classification |
intergenic |
Length |
463 nt |
Genomic location |
chr1+:110954799..110958896 |
Exon number |
3 |
Exons |
110954799..110954915,110956774..110956853,110958631..110958896 |
Genome context |
|
Sequence |
000001 AGTGTCTTCA TCTCTGCATC CCTAGTGCAA CAGAGCATGA CAAAAATTCA ACAAATATTT ATTGAAGAGT CTTGATGTCT 000080
000081 TTTGGGAAAG GAACTCTATG GTTACCTTTA CTCTAAGTTA AAAACAACAA CAACAACAAC AAAAACACAA AACCCTGAGG 000160 000161 CTCAGAAGAT AAATATTTGC TGAAGATCAC TGTGCTTATT AGATGGGTGT TACTGATTCT TACCTCAGAG AAGAGAATGT 000240 000241 CATGGAGACA AAATGACCTG CTTAGAGTTC TGCACCCCCC AGCATGGAGA GCAGAGCGCA AAGATTTCTT CCGGACTCCC 000320 000321 ACATTCCCCT TGGAATCCAA GAACTGGTCT ACTGTCACAA CACTTTAGTA CCCTCTTGTA AGCCTGTGGA CAAATCCTCT 000400 000401 GATGCCTTGA TACCTCGGTT TTCCCCCACT ATAAATGGGA AGATAAATTC ACTAGAAACA GTA |
Predicted Small Protein
Name | ENST00000585330.1_smProtein_236:367 |
Length | 44 |
Molecular weight | 5229.93 |
Aromaticity | 0.139534883721 |
Instability index | 42.9209302326 |
Isoelectric point | 10.7805786133 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.0399348928761 |
Amino acid sequence | MSWRQNDLLRVLHPPAWRAERKDFFRTPTFPLESKNWSTVTTL |
Secondary structure | LLLLLLHHHHHLLLLHHHHHHHHLLLLLLLLLLLLLLEEELLL |
PRMN | - |
PiMo | - |