ENST00000585366.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000585366.1

Source

Gencode19

Same with

NONHSAT058444

Classification

intronic(AS)

Length

4745 nt

Genomic location

chr18-:13514519..13522887

Exon number

2

Exons

13514519..13516106,13519731..13522887

Genome context

Sequence
000001 TTTACAAACT TCGTACATAC ATTTAAGATA ACACTATCAA ATATTTGCAA AAAGCTGACA ATGAATTTCT GACTAAAATC 000080
000081 CCCCCCCAAG CCCCAAAACA CCCTAGGATT TACTGCTGGG TTTTTAAGTG TTAGGTTCAT TTAAAAGAGT AGAAAACACA 000160
000161 TTCGGCTTAG ATAAAAAAGA CAGAGCTAAA CATTCCAGAT ATGGCTTTTG TGTCTGATGC CATATCATTC TAGTCCTTTT 000240
000241 TTTGTAGCAT GTAAGCTTCT ACCTGGATGA CACAGGACAA AGACTGTTGA GGATTTCAAG CAGGTGCCAT GTTCCAGGAC 000320
000321 ATGAAGCCCA GCAAGTCAGT CACATCTCTG AAAACAGATC ACATTTGCAG TTTAAACAAA CAAACAACCC CTTAGGACCA 000400
000401 CTCAGTGCAG ATACGAGATA TGCAGACTAG CCCTTCCAAG GACCTGCAGG GGAAAGATAT GTAAAAGGCA TGCTCTTAAG 000480
000481 CAACATTATA CGATGAGGGT ACAGTGCAAT GCTACACAAA TATTAAAAAA ACAAAAAACA AAAAAAGGTC TGTTGTAGGA 000560
000561 GATTTTCTAG AATCATGTAT AATGTTCCAC TTTCAAGGGT CTGCCTGGAT AGCAGGAGGA GAGGTCCTTT GGTTCTAGAA 000640
000641 AACAGCAAGG CTACAGGCTA ATAGAGAATT ATGCAGCTTG TCCAGAGAGC AAGAAGTCAG CCTGGCCAGC CACTGCTAAA 000720
000721 AAGCAAGGCA ATGGAATGCC ACAGCATTTA TCACCTTAAA CAAAAGAAAC AGATGGGAAA TATTTTCCAG TTTTCAAAAT 000800
000801 ACTGCTTTAG GGGAAAAAAA TGATAAAAAC AAACATGTTC AACAAGTAGC ATTTGTTAAC TAAGAGCTTC ACGTGAATTA 000880
000881 CTTCACCATA ACCCTGCAAA GTAAGCACTA GTGTCCTTAG CCCACCTGCA GACAGGAGAC CAGGGCACTG CATGTTCAGC 000960
000961 CACTTGCCAT GGAGACAAAA CCAAGTCTTG GAGCTGATTA CTCACCAGCC TTAGAGAAAA CAGAGACGGC TACTAGATTT 001040
001041 CAAATTACAG TGCCAGTAAT GTCTATTACT CTTTGTATAA TTTCCTTATT TTTCCATATA TCTCATTCTC ATCTTACAAG 001120
001121 AGTGCCCATA TTTAAGATAA TTTTTGTATG CCAAAACAGA GCAGGTCACC AACATGGCTG AGAGAAAGCT CAGATGACTC 001200
001201 CTCGTCACGT GCTCATGGAA CAGACCCCGT GACAACTTCA GTTTCCAAAT CAAATGCAGC AACTGCTCCC TTCTTCCTCC 001280
001281 TCACGCCACT CATATCACAA AAGAGAGCAA TGACAGAGGA TGACTGTCAT CTTGTGGGTT TGTACCACCT CCCAAGTTAT 001360
001361 TCCACTGGCA ATCCATCCAG CACAGGTACT CAGAGAGGAC ATTAATAAGG CAATCTGTCA TACTTTCAAC TCTCCTGGTT 001440
001441 TGTTTTGCTC TATCCCATCT CTAATGAGAG CAAGTGCAAA AGCTCCTAAT GACTCCAGAT CTTCCACAAC AGGCTGATTT 001520
001521 TTACACCTGT AGCAAATCAC AAAATAGTCT AATCATGTAA ATATGCTTAA CAAGAAGGTA ATTAATCTTC TCAACCAAAT 001600
001601 TTTGCAAACA AATATTCATG GTTAAGACAC AGAACAATTC CCAAGTGTTC AGGTCCTCAT AGCTTGCAAA GCCAGGCTGC 001680
001681 ACGAGTGCCA GCGATCAAGA GTCGGTTGGG TCAGCCTCTC CCAAACTGCC CTTCATGGGA CATATGTGTT CTGCAAGCTG 001760
001761 CTAATGGGTC TTTTTCTAAA AACAAAAAGG ACTCCAAGGC TACAACAGTA GGGAGACTGA CTCATTAAGC AAAGTCTAAC 001840
001841 GGGCTTTCTG ACTCTGCAAG GCATTCACTA GGCTACCTCC AATGGCGAGT CTTCAGGAAG ACGAATTCCA GTGGCCTGTC 001920
001921 CAAGAGGTGC CGAGGGTGGG GATGTATTCT CCAACAGCAA CATCCCTTGC ATTCTCTGAC AAAGACTTTC CTGTCCTGTC 002000
002001 TTCTTAATCT CAAGTGAATG TGAGGGCTTT TTTTTTTTCA GACAGTCTCG CTCTGATGCC CAGGCTGAAG TGCAGTGGCA 002080
002081 CAATCAGGGC TCACTGCAGC CCCTAACTCT CAGGCTCAGG TGATCCTCCT GCCTCAGCCT CCTGAGTAGG TAGGACCACA 002160
002161 GACACCTGCC ACCATGCCCA GCTAATTTTT TAATTTTTAG TAGAGACGAG GTCTCCCTAT GTTGCCCAGG CTTGTCTTGA 002240
002241 ACTCCTGGGC TCAAGAGACC CTCCCATCTT GGCCTCCCAA AGTGCTGGAA TGATAGGTGT GAGACACTGT TCCCAGCCTG 002320
002321 CGGGTATTTT TAAGTTGTTC CCTCTGAGTC TCCCATCCTA AAGAACAGCT GCCCCGAGCA CTTCCTATGT GGACATTCCA 002400
002401 GGCAGCTGGG CCGTGTACAC GATGTCCTCC CGCTCTGTCT GAATATGTCA CTTCCTTTGT CAAGAGACAT CTATTAATAT 002480
002481 CTCAGCAAAC AGAGCACTAA AGATATGTAA AGTACAATTT AGGAAGAATC ACCCTAGAGT CTAGGGTGAT GGTTATTCTA 002560
002561 TACCCCACTG CTACTATTCA AGGTTCTCCC TCCTCTCGAT CAGAGGATGC CAACAGGGCC AACTTTCAGG GGAAGCTGAA 002640
002641 GACAGGCTTT AGCAGACTTG GGAAGCTGCC TCCAACTAAA CGGTGAAAAT TCGACTCATC CCCATGAATT CTTCTGAAGA 002720
002721 ATTACCAGCA ACATTTCATT GCCCAATCCC CTAACAAGTG TGTGATAAAA AAGAACTGGC AAATTATAGG GTCTATAGAG 002800
002801 GATTCTTATG GTTGAGAAAA TTCCTTGTTC TCAAGGGCAC ACACAGGTCT ACCCTCTTTT TCATGTGTAT TCATTACCTA 002880
002881 AATGCACCTG TAGCTAGTGC ATATTTTACG TAGCAAATTC CAAGTATGTT TTAAACTTTA AGCTTTTGTA CTTAACAGCA 002960
002961 TAGACTTGAG GCAACAGGAC TTAGTTATAA AATATCCTCA GAAAATTTGA AGCTCATGAA AATGAAAAAT CAATATGAGC 003040
003041 TGGTAAACCA GCACTTTTTG GGTATTTACC TGAGATAACA TGAGGTATGG TGGAAAATTT CATTTCCACT TTTTTGTTTT 003120
003121 TTAGAGACAC AGTCTCCTTC TGTCACCCAG GCTGGAATGC AATGGCTCAG GCCTGTAATC CCAGTGCTTT GGGAGGCCAA 003200
003201 GGTGGGTGGA TCACTTGAGG CCAGGAGTTC AAGACCAGTC TGAGCAACAT GGTAAGGTCC CGTCTCTACA AAAAAAAATT 003280
003281 TTTAATTAGC CAAGCATGGT GGCATGTGCC TGTAGTCGCA GCTACTTGGG AAGCTGAGGT GGGAGGATCC CTTGAGCCCA 003360
003361 GGAATTCAAA GCTGCAGTCA GCTATAATTG TGGCACTCCA GGTTGCACTC CAGCCTGGGC GACAAAGAAA GACACTGACT 003440
003441 CAAAACAAAA TGAAACGAAA CAAAACAAAA AATTTCAGGT TGCTTAAGAA ATTCCCCATA AAATGCAAAT AAATACCTCA 003520
003521 AGCAGTAGTG ATCGTAATAT AATTTAGAAA TGTTTCAGCT CTCCAAATCT TGTGTCATTG TCTGACTTAT TTATTAGGTC 003600
003601 CTTAAAAAGG TAAAATAAAG AACCATTGTT AAATGATGAA ACATAAACGT GAATTTGTAA GTCTACTGAG ATTCCTTCAA 003680
003681 GAGGCTGGCA AAACAGCAGG AACCTTTCAC CAGTGCTATA CATCTGATCA GTCACTTGCA TTACATGACA ATTTAGCATT 003760
003761 TGCTCATCTG TGTTGGTGTC TATGTGCTGT AGTTTTAGTT TTTGTTTTTT AAGACAACTG TCCTATAACC ATAAGCCATC 003840
003841 TAGGACAACC TGGCTTCAAA GTTACATTCA AAGTGACATG CAAGAACCAC CACCACTCCT TGTTTGTCTC CTGTTCTTTG 003920
003921 CTCCACATTT GGAAGCTTTT CAAAAAGCAA AGTCAGAAAT ACTCATCCTT CCTTCCCTCA TGCCTACAGG CAGCTCACCA 004000
004001 AGGATTTTGG TTTCTTTAAA ACCAATGTAA TAACAGAGGC AGGCAGAAGA AAGAATGCAC GCCAGTGTTG TGCACAAGGA 004080
004081 AGGCCTATTC GGGAGACGAA CAGAACCCAA GCCTATCGAG ACCATATGCT CCACCGCTTA CATTTGTCTT CTCTAAAGGC 004160
004161 TGACCCTTTA ACAGTTATGT AATTCAGTTA CTTCACAACC ATTTAAATAT AGCAAAATGT CCACAAAGAA AAAAAGTTGC 004240
004241 CCACCCACCT AAATACCTTC CATGCTTTGC CCACAGTGGT AATGTGGGGG TGGGGGTGGG CAAACATGCC TTTCAGTGAA 004320
004321 AGCATGGAGA GATGTTACAG TCCAGGGCTT GAAAGAGCCT CTGTCAATGG CTTGCTCACC TACAAATAGT GTAGGGTGGG 004400
004401 TTTGAGCAGA GACGTTGAAC CTACAACTCT CACCTGTGCA CCAGGATGTT TGCAGAGGCT GGGCAGCAAC ACCAGCCTGG 004480
004481 GTTTCACCAG GGCTTCTGCA TGAGCTTAGC TCATCAAGCT GCATTGCATT AAGCCTGTGA TCCTGGGATT AGCTCAGAGA 004560
004561 CACAGCTGTC CAAGGTGGAA GTTACAAGAC CAAGCGAACC CACGGCTTCT TTAAATAAAT ATACACATAG ACACAAATAT 004640
004641 GGAATTTAAA TAGTCTTAAG ACAGTGTTAA CAAGTAGTCC CCAGAGAGGG CTACCACGGC CTATGATGTC AGCCTTTCCC 004720
004721 ATTACCTCGT CTGTCTCTAT TTGGC
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Predicted Small Protein

Name ENST00000585366.1_smProtein_3248:3511
Length 88
Molecular weight 10118.0091
Aromaticity 0.0804597701149
Instability index 57.9183908046
Isoelectric point 11.4354858398
Runs 15
Runs residual 0.0341543513957
Runs probability 0.0438202908791
Amino acid sequence MVRSRLYKKKFLISQAWWHVPVVAATWEAEVGGSLEPRNSKLQSAIIVALQVALQPGRQR
KTLTQNKMKRNKTKNFRLLKKFPIKCK
Secondary structure LLLLHHHHHHHHHHHLEEELLEELEEEEEELLLLLLLLLLHHHHHHHHHHHHHHLLLLLL
LLHHHHHHHHLLLLLLLHHHHLLLLLL
PRMN -
PiMo -