ENST00000585381.3
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000585381.3 |
Source |
Gencode19 |
Same with |
, |
Classification |
antisense |
Length |
1083 nt |
Genomic location |
chr2+:118752973..118754611 |
Exon number |
2 |
Exons |
118752973..118753366,118753923..118754611 |
Genome context |
|
Sequence |
000001 TCTGAGGCTA CGCAGGACTC TGACAGAAGA ATACGGCCAG GGGACTTACT GAGAGGTCCA CAACTGTCTT GATGGCCTTT 000080
000081 TCTTTTCTCT TTATGAAGTC ATCATCCTAC AAGACAAAAC AGAGCGATTA AACAAATCCC AAGGGAAAAT TAAAACTCAA 000160 000161 GTGGACCACT CAGATATGTC TTATAAATTG ACTTCTCATC TCATCACTAC TTTGCCTGAC GAAGTCTCAA TTTTCGAACA 000240 000241 AATTGTAATA TATTCTCCAT GGGAAAAGGC TACAAACCCT GCAGATGGCT CCAACATAGA TCCCTACACA GCCAGTAAGA 000320 000321 AAAAGGGGGT CATAAGGAAT AGTGCTTAAG ACGAGAGTTC TCATTTCAAA TCCTCTTAAG CACTGAAACC TCAGCTCGTT 000400 000401 TCACCAGCCA CTGGGGAAGA AAGTGAAAAG ACAAGAGTTG CTAAGGACAA CATCCCACTG AAGTGAAGGC CAGTTCAGAC 000480 000481 ATGGCCCAAC TCATGAACTC AAATCAGCAT AGTTGAACTG ACTAGGTGAT AAGAAGCTAT CAACACATGC TGTTCTATAG 000560 000561 GAAAAGCAAC CAGCTGGGTA TCCAAGATGT TAAGATCCAA TGGGACCTAG TGCTGAGTAG CCGTGCAGGA GCTTTAAAGC 000640 000641 CTTACTTCAC ATCCTTGAGC CTCAGTTTTC CTTTCTGTAA AAGTATATCA GTTCCCTTCA CCTCACAGAG CTAACATGGG 000720 000721 AGTAAATGAA ATCACAAGTA GTAGAGTGAT TTGTAAACAC CTGAAGCACA AAACAAACAG AGCTATCTCC CAACTTCCTG 000800 000801 GTCCTACTGG CAGATCTTCA TGTAAATCTC TTTTTCTTGT GCTCCTTACA CGACAGACCA GGGAAAAGGG AGAGAACCAC 000880 000881 AGAGAATGCT AGTGTAACTC CCCATTTGAC AAGTGAAAAA ATGTCCAAAA TACTCAGATT TGACAATGGT GCATACTGAG 000960 000961 TACGCAGTTG AAGGCACTGG TTTATCCTGA CATTCATAAC ATTCTCTCTT AATCCTCACA ATGTCGGATG GTACTGGCTG 001040 001041 AGTTTTACTG AACCTGAAGT GCCGGGAGAC TATATAACTT ACT |
Predicted Small Protein
Name | ENST00000585381.3_smProtein_71:130 |
Length | 20 |
Molecular weight | 2233.5613 |
Aromaticity | 0.210526315789 |
Instability index | 71.8105263158 |
Isoelectric point | 9.52459716797 |
Runs | 5 |
Runs residual | 0.0123839009288 |
Runs probability | 0.041688747571 |
Amino acid sequence | MAFSFLFMKSSSYKTKQSD |
Secondary structure | LEEEEEEELLLHHHHLLLL |
PRMN | - |
PiMo | - |