ENST00000585495.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000585495.1 |
Source |
Gencode19 |
Same with |
NONHSAT055120 |
Classification |
intronic(S) |
Length |
716 nt |
Genomic location |
chr17+:59460762..59462041 |
Exon number |
3 |
Exons |
59460762..59460915,59461022..59461306,59461765..59462041 |
Genome context |
|
Sequence |
000001 GCCTGGGCAC AGTGCTGTCT CCTCAGGGTC AGGGAGACAC TTTCAGAAGG AGTAGGGGCA CTAACTCACC ACCCCCACCC 000080
000081 CTGTTGAACC CCCAGCACAC TGTCTTGCTC GGCTGCAAGC CCGCAGCTTT GGCCTCAGCT GTTAATCCTC TCAGAATAGG 000160 000161 ACGGACCAGT GGCAGGGAGG AACGCGCGTC TGCCTGTGGA ATGAGAGACT GTGATTTCTT AACCTTGATG GAAAAGGGGA 000240 000241 AAGCCACATC TTACCAAACT CTTCCGCTGC GTCGTAGGGA ATTTAATTAC ATTTGGACAT TTGAATGAGA AGCAGATGTG 000320 000321 GCTCTGGCCC GCCGGCCAGC AGCTCTCAAA GGACAGCCAC TCTCCTGTGG TCTGCAGGGC TCAGTGCTAT CTCGTCACGC 000400 000401 TGGAGGGTAG CTCGGGGAGA CCCCTTCCTG GGAACTAGGA GCCGTACACG CCCAGTGAGG TCACTAGAGC AGACCCTCCC 000480 000481 CTCCTGTGCC ACAGATGCTG ACGCAGATGA GAAGTGAAGT GACTTGCCCA GGTCATTTGG CACATCTGTG ACAGAACTGA 000560 000561 GGCCAGAGTG AAGTCTCGGC CTCCTCGCAC AGTCCTCCTC CTCCCTGGGC CATCCACAGG GAGTGGTAGG GCAGGGCTTC 000640 000641 TCCCACATCT GGCCGATCCT GAGCATGGCT CCAGCCAGTC CTCAGATACA TCCAAACCAG CGACAGAGGA GCTGGG |
Predicted Small Protein
Name | ENST00000585495.1_smProtein_200:307 |
Length | 36 |
Molecular weight | 4360.9892 |
Aromaticity | 0.171428571429 |
Instability index | 49.0257142857 |
Isoelectric point | 7.91815185547 |
Runs | 7 |
Runs residual | 0.0188861985472 |
Runs probability | 0.0370833017892 |
Amino acid sequence | MRDCDFLTLMEKGKATSYQTLPLRRREFNYIWTFE |
Secondary structure | LLLHHHHHHHHLLLLLLLLLLLHHHHHHLEEEELL |
PRMN | - |
PiMo | - |