ENST00000586209.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000586209.1

Source

Gencode19

Same with

lnc-RPS6KB1-1:1,NONHSAT055049

Classification

intergenic

Length

1603 nt

Genomic location

chr17+:58042457..58074333

Exon number

4

Exons

58042457..58042549,58043764..58043828,58070249..58070340,58072981..58074333

Genome context

Sequence
000001 GGTGACGTTT GGTCTGAGCT GACCTTTCCT CACAATCGTG AATTTGGGCT GTGAGGATCA GGCCTTGTCA GAACCCGAGA 000080
000081 TGAGAGGAGA GAGATTTCTG GTTCAGTAAG GGTGAGAGCC AGGCTCCAGA CTATAGTGAA TTTTCCGAGG AGATATGTAT 000160
000161 GACCTACAGT GACTCTGACG CTAAATCTGC AAGTTCTTTT AACACCACGG AAATAATGTC TAAATGCTCA AGACAAAATC 000240
000241 ACTTATGGTG TTGTCTACAT ACCTTATGAC ATCGTGTATG GCAAGGCACT TTAAGGTCAG AACTACAGAT GTCAAACTAG 000320
000321 TTCTCTTAAT TTCAGGGATC ACATGGTCAG GCATACACTG GTTCCAAAAA TCTTTACTAT AGATCCGAAA GCATTTTCCT 000400
000401 GAAGAAGTCC TGCCAGCTCG GCCACTTCGC TGTAATGCCT CGCTCCTACA AAAGGAAAAA AACCCAAAAA TTCCCCAAAA 000480
000481 TGTTCTGTGG GTTTCTCAGG TAATTTACTT TGTCTCCCCA AAACAGCTAG AAATTACCTA ATCAGTTGTT CTTTGAATAA 000560
000561 AAAGATTTGA CATAGAGACT TACTTTGAAA TTGGAACCAC CTCCAGGATG TCCAACCCTA ATCTGGGGTT GTGATTTAAC 000640
000641 TGCTTCACAA AGCCACCATC TACCACATAT CTAAGAAGAA TCAAAGCAAG TTAAGTTTCT GGAAAATAAA AGAAGACTTG 000720
000721 TTAATTGTTA ACCACTTTGG TTTCTCCTTT TCTAGCAAAC TAGCAGGTAC ACAATGCCTT TTATGTTAAG TGTAAAACTT 000800
000801 GAAAGTCAAG AAATTGGAAC CCTCGTATGT TGTTGGTGGG AATGTAAAAT GGTTCAGCCG AGGTGGAAAA TTGTTCGGAG 000880
000881 GTCCTCAAGA AGTTAAACAC AAAATTACCA TATGATCCAG CAATTCCATT TCTAAGTGTA CACCAAAAAG AACTGAGAAC 000960
000961 AAGTACTCAA ACAAATACTT ATAGACCAAT GTTCATATCA GCACTATGAA TCACAGCCAT AAGGTAAAAA CAACCTAAAT 001040
001041 GTCCATTAAC CATTAATGGA AGAAGGGATG AACAAATTGC TTTGCATATA TGTATGTAGT ATATATACAC ACGCATATAT 001120
001121 ACACACACAA TGGAATATAT ATATATATAC ACACACACAC TATGCAATAT TATTCAGCCA CAAAAAAGAA TGAAGTACTG 001200
001201 ATACATGCTA CAATGTGGAC GAACCTCAAA AATATTATGC TAAGTGAAAG AAAGCAAACA CAGAAGGCCA CATATTATAT 001280
001281 GATTCTATTT GTATGAAATA TCCAGAATAG AAAATACCTA CTGCTTCCTG CTGACACATC TAAAGAATTT TTTAAAAAAG 001360
001361 AAAATACGTA CAAACAAAAA GTAAGACTGG TAGTTGCCAA GGGCTGGGGT CGAGAGGGGA ATGTGGAGTA CCTGCTTAAT 001440
001441 GGGTATGGGG TTTTATTTTG AGGTGTTGAA ATATTTTAGA ACTAAGCAGA AGCAGTGGTT GCGCAATACT GTAAATGTAC 001520
001521 TAAGTACTAC TTAATTTTTC ATTTTAAATG ATTAATTTTA TGTGAATTTT GCCTCAATAC AAAAATACAC AAACTTGAAA 001600
001601 GTC
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Predicted Small Protein

Name ENST00000586209.1_smProtein_1055:1192
Length 46
Molecular weight 5508.3325
Aromaticity 0.177777777778
Instability index 51.4155555556
Isoelectric point 6.95159912109
Runs 8
Runs residual 0.0155303030303
Runs probability 0.0639573396926
Amino acid sequence MEEGMNKLLCIYVCSIYTHAYIHTQWNIYIYTHTHYAILFSHKKE
Secondary structure LLLLLLLEEEEEHHHHHHHHHHHHHHHHLHHHHLHHHHHHHLLLL
PRMN LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
PiMo oooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiii