ENST00000586761.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000586761.1

Source

Gencode19

Same with

NONHSAT003213

Classification

antisense

Length

1288 nt

Genomic location

chr1+:52259657..52264824

Exon number

2

Exons

52259657..52259746,52263627..52264824

Genome context

Sequence
000001 GAGACCCAGC TGGTACGACC TCAAGAAGTA AGGGGCTCTG GATCATGGAG TTGTCACCCT AAAACAGAGG TGATAAATCC 000080
000081 TTCCTCTCAG GGATGAGTTC TCACTGTGTT GCCTGGACTG GTCTCGAAAT CCTGACCTTA AGTAATGCTT CTGCCTTGGC 000160
000161 CTCCCAAAAT GCTGAAATTA CAGGCGTGAG CCATCATTCC CAGCCCAGCA GTCTTCATCT TAAGAAGAAA GCTGCCCAGC 000240
000241 ATCAGAGGGG TCAGGTTCCC TTCTAAACAG AATATGATAA TGCTGGCCTG CCAAAACTAC AGCTTCCCCT TTAGGAAAGA 000320
000321 ACTATGGCAA TTCCAGAGTT CACAACTGCA TTCAGACCTG GCCTACAGAG CATCTCACAC TCACTGTGCT TGTGACATTC 000400
000401 CCTTGTACCA GGCCCTCCAC AAAGAGCTGG GATTTGAATT CTTTGACGAA GCTCAGCAGA GACTCAAGGG AAAGGCCGTC 000480
000481 CATCAAAGCC TGGTACTTGT CAATCATAGA CCAACGGGCA TATTCCAAGA TTAAAAGCCG TACATCTCTG TACAGAGGGC 000560
000561 AGAAAAAAAA CACTCAAAGT TTTGTTATTA GAAATGAATC TTCAGAATAA AGAAATGTTT GGTCAAAGTT CTATAAAGGA 000640
000641 TGTGTTTCTA AAGAGAGACC ATTTTTATCA CAATGTAAGA TGGGAAAACA GTATCAGATT AACCAAAAAA GTACTGAAAA 000720
000721 CCACATACAC AAACTTTAAA CAAATTTACT TAGCAGTACA AAAATGCACT TACCTGTCTC AGTTGCAGGG TAAAATATTT 000800
000801 CACATAAAAG TAAAGCTGCC AGATGAGTCA AGTTTACTTA GTTGTACACT GATTTAAAAT TATTACTATT TTGGTTTGAA 000880
000881 ATCTCACTAA TATTTCATTA ATTACTAGAA GCCATCATTT GGGATATCTA TTACTGCAGT GACAATATAA TACAGGTAAC 000960
000961 GGCTCTGGTC CAGAATCAGA TTAACTTCAT CCCCCATTTC CACAACCCCA CCCCAAATAA GCTGTTTGAA TTTGACAAAT 001040
001041 CTACTAACAT CTATGATTCA ATTTCTTCAT TTGTAAAACA GGGGAAGTAT TCGTGAGAGG TAACCGTTTT GGATAGAATT 001120
001121 GAATTAATGA ATTTATATAA CAGTTCTTAG ATCTAGCACA AAAATCTTCA ACAAACAGGT TTATTATTAT TCTTTTATAA 001200
001201 AGTAAATTTC AGGAGTTGAA TTTTAATAAA ATAGAAGGTT GTGTTTAATA ATGTATTTTT ATAAATAAAT AAAGTAGTAT 001280
001281 TCATGAGT
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Predicted Small Protein

Name ENST00000586761.1_smProtein_593:856
Length 88
Molecular weight 10341.0219
Aromaticity 0.114942528736
Instability index 56.1173563218
Isoelectric point 9.73699951172
Runs 14
Runs residual 0.0226600985222
Runs probability 0.0298407651349
Amino acid sequence MNLQNKEMFGQSSIKDVFLKRDHFYHNVRWENSIRLTKKVLKTTYTNFKQIYLAVQKCTY
LSQLQGKIFHIKVKLPDESSLLSCTLI
Secondary structure LLLLLLLLLLLLLHHHHEELLLLEEELLLHHHHHHHHHHHHHHHHLLHHHHHHHHHHHHH
HHHHLLLEEEEEEELLLLLLEEEEEEL
PRMN -
PiMo -