ENST00000586761.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000586761.1 |
Source |
Gencode19 |
Same with |
NONHSAT003213 |
Classification |
antisense |
Length |
1288 nt |
Genomic location |
chr1+:52259657..52264824 |
Exon number |
2 |
Exons |
52259657..52259746,52263627..52264824 |
Genome context |
|
Sequence |
000001 GAGACCCAGC TGGTACGACC TCAAGAAGTA AGGGGCTCTG GATCATGGAG TTGTCACCCT AAAACAGAGG TGATAAATCC 000080
000081 TTCCTCTCAG GGATGAGTTC TCACTGTGTT GCCTGGACTG GTCTCGAAAT CCTGACCTTA AGTAATGCTT CTGCCTTGGC 000160 000161 CTCCCAAAAT GCTGAAATTA CAGGCGTGAG CCATCATTCC CAGCCCAGCA GTCTTCATCT TAAGAAGAAA GCTGCCCAGC 000240 000241 ATCAGAGGGG TCAGGTTCCC TTCTAAACAG AATATGATAA TGCTGGCCTG CCAAAACTAC AGCTTCCCCT TTAGGAAAGA 000320 000321 ACTATGGCAA TTCCAGAGTT CACAACTGCA TTCAGACCTG GCCTACAGAG CATCTCACAC TCACTGTGCT TGTGACATTC 000400 000401 CCTTGTACCA GGCCCTCCAC AAAGAGCTGG GATTTGAATT CTTTGACGAA GCTCAGCAGA GACTCAAGGG AAAGGCCGTC 000480 000481 CATCAAAGCC TGGTACTTGT CAATCATAGA CCAACGGGCA TATTCCAAGA TTAAAAGCCG TACATCTCTG TACAGAGGGC 000560 000561 AGAAAAAAAA CACTCAAAGT TTTGTTATTA GAAATGAATC TTCAGAATAA AGAAATGTTT GGTCAAAGTT CTATAAAGGA 000640 000641 TGTGTTTCTA AAGAGAGACC ATTTTTATCA CAATGTAAGA TGGGAAAACA GTATCAGATT AACCAAAAAA GTACTGAAAA 000720 000721 CCACATACAC AAACTTTAAA CAAATTTACT TAGCAGTACA AAAATGCACT TACCTGTCTC AGTTGCAGGG TAAAATATTT 000800 000801 CACATAAAAG TAAAGCTGCC AGATGAGTCA AGTTTACTTA GTTGTACACT GATTTAAAAT TATTACTATT TTGGTTTGAA 000880 000881 ATCTCACTAA TATTTCATTA ATTACTAGAA GCCATCATTT GGGATATCTA TTACTGCAGT GACAATATAA TACAGGTAAC 000960 000961 GGCTCTGGTC CAGAATCAGA TTAACTTCAT CCCCCATTTC CACAACCCCA CCCCAAATAA GCTGTTTGAA TTTGACAAAT 001040 001041 CTACTAACAT CTATGATTCA ATTTCTTCAT TTGTAAAACA GGGGAAGTAT TCGTGAGAGG TAACCGTTTT GGATAGAATT 001120 001121 GAATTAATGA ATTTATATAA CAGTTCTTAG ATCTAGCACA AAAATCTTCA ACAAACAGGT TTATTATTAT TCTTTTATAA 001200 001201 AGTAAATTTC AGGAGTTGAA TTTTAATAAA ATAGAAGGTT GTGTTTAATA ATGTATTTTT ATAAATAAAT AAAGTAGTAT 001280 001281 TCATGAGT |
Predicted Small Protein
Name | ENST00000586761.1_smProtein_593:856 |
Length | 88 |
Molecular weight | 10341.0219 |
Aromaticity | 0.114942528736 |
Instability index | 56.1173563218 |
Isoelectric point | 9.73699951172 |
Runs | 14 |
Runs residual | 0.0226600985222 |
Runs probability | 0.0298407651349 |
Amino acid sequence | MNLQNKEMFGQSSIKDVFLKRDHFYHNVRWENSIRLTKKVLKTTYTNFKQIYLAVQKCTY LSQLQGKIFHIKVKLPDESSLLSCTLI |
Secondary structure | LLLLLLLLLLLLLHHHHEELLLLEEELLLHHHHHHHHHHHHHHHHLLHHHHHHHHHHHHH HHHHLLLEEEEEEELLLLLLEEEEEEL |
PRMN | - |
PiMo | - |