ENST00000587276.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000587276.1

Source

Gencode19

Same with

NONHSAT059101

Classification

intergenic

Length

470 nt

Genomic location

chr18-:42748565..42761079

Exon number

4

Exons

42748565..42748783,42749061..42749104,42759851..42759943,42760966..42761079

Genome context

Sequence
000001 ACACAGTGAT GGCCTGCAGT GGTGAACCAG TGAGGGAACA AGTCCTATGG TTGGGGAGCT ACCTGAGGCT GGAGAGCAGA 000080
000081 GTACAGCCAG GCCCACAGTG GTGCAGCATA CCAGAGTCAA GGTCTCACTA GGATGTCCAG GCTGGCCTCG AACTCCTGGG 000160
000161 CTCAAGCAAT CCACCTGCCT TGGCCTCTGA AAGTGCAGGA ATTACAGAGG AGTGTATTTA GAGTCAACAA CCACACATGG 000240
000241 CTAATCTCTC AGAATGTTTC ATCATGAGAT GTGAGCATCA TGTTCCAGGC CCTGAGTGCT TCATAAAAAA AAAAGTTCCT 000320
000321 TTTCCACCAA AACAATGCCC TGATTTGAGT GCTTCATCAA AAGAGAAAGA TTTCTCATGA TAAACCATAT TCTAAGCACT 000400
000401 TAGATCACAA TATAGTAAAT TTTCAAAAGG AAGTCACTTT TGCCAAGATA TAAAGGCTCA TGTACGTAAA
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Predicted Small Protein

Name ENST00000587276.1_smProtein_236:379
Length 48
Molecular weight 5338.212
Aromaticity 0.0851063829787
Instability index 60.9872340426
Isoelectric point 7.68389892578
Runs 6
Runs residual 0.0386170212766
Runs probability 0.0158246481776
Amino acid sequence MANLSECFIMRCEHHVPGPECFIKKKVPFPPKQCPDLSASSKEKDFS
Secondary structure LLLHHHHEEEELLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -