ENST00000587937.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000587937.1 |
Source |
Gencode19 |
Same with |
NONHSAT068070 |
Classification |
intergenic |
Length |
537 nt |
Genomic location |
chr19+:56207251..56209196 |
Exon number |
2 |
Exons |
56207251..56207664,56209074..56209196 |
Genome context |
|
Sequence |
000001 AAGCCCTGAT TTCCCTGACC CTCCCAGGTC AAGGGATGGC TGGGTTGAGG GTGGACTGTG CGAGGCCTGG CGGAGCTGTA 000080
000081 GCCCACACAG GTCCAGGTGG TCGGGAGGCC ACTCATGGCC AGACGCTTCC GGTGCAGGAG GCCTTGCTCT TGTGTTGAGG 000160 000161 GGACACCAGG ATGAGGTCAG AGAGTGCACT GGGGTTCAGG GAGGAGAAGA ATCCTGAGAG ATGGCACATG TGCAACACAG 000240 000241 GTCACCGTCG CCATCGCCCG GGCCCACCGC AAGCATCACT AATCCATCCC TGCACTCCTG GAAAGCCGGG TCAGCCTCTG 000320 000321 CCGGCTGAGC TGAGTGGACC ACCAGGCGCC TCCTGGTTGT CCTCTGTGTG CTGTTTTCCT CTGTGTGCTC TTGTCCTGGG 000400 000401 CTGGACCACA CCTGAATATT CCAGCCACCA AAGTGCTCAG CAGGAGCTGC TGTGTAGGAG TCCCCCATGA GGCCCAAGCA 000480 000481 CCTGAGCTTA GTGACATACA CGGTTGAACG CTGGGAGAAT GCTGGGAGCC TGCTGTT |
Predicted Small Protein
Name | ENST00000587937.1_smProtein_170:469 |
Length | 100 |
Molecular weight | 10868.2727 |
Aromaticity | 0.0606060606061 |
Instability index | 78.7646464646 |
Isoelectric point | 8.30645751953 |
Runs | 12 |
Runs residual | 0.0124777183601 |
Runs probability | 0.0434331390213 |
Amino acid sequence | MRSESALGFREEKNPERWHMCNTGHRRHRPGPPQASLIHPCTPGKPGQPLPAELSGPPGA SWLSSVCCFPLCALVLGWTTPEYSSHQSAQQELLCRSPP |
Secondary structure | LLLLLLLLLLLLLLLLLLEELLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLLLL LEELLLLLLLHHHEELLLLLLLLLLLHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |