ENST00000588453.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000588453.1

Source

Gencode19

Same with

NONHSAT066216

Classification

intergenic

Length

1701 nt

Genomic location

chr19+:38888821..38890521

Exon number

1

Exons

38888821..38890521

Genome context

Sequence
000001 TCCCACCTTT TATGTTCTCC CCCTCCATTA ACCCCTTCTC TTCCTATTTA TTTATTTATT TATTTATTTA TTTTGAGACA 000080
000081 GAGTCTCGCT GTATCACCCA GGCTGGAGTG CAGTGGCACA ATCTCGGCTC ACCACAACCT CCCCCTCCCG GGTTCAAGCC 000160
000161 ATTCGTCTGC CTCAGCCTCC CGAGTAGCTG GGATAACAGG CATGTGCCAC CACACCCAGC TAATTTTTTG TATTTTGAGT 000240
000241 AGAGACAGGG TTTCACCATG TTGGCCAGGA TGGTCTCAAA CTCCTGACCT CATGATCCAC CTGCCTCAGC CTCCCAAAGT 000320
000321 GCTGGGATTA CAGGCATGAG CCACTGCACC TGGCTCTCTT CCACTTTAGA GTGAGAAGTT GCTTCAGGAA GTTTGAAAGC 000400
000401 CTGTTTCATG GCCCACTGAG TCTCTTCTGT GCAAAGGGGG GTGCCACAGG CTTTTTTCCC CCAAGTGAAA TGGGGCTTCC 000480
000481 AGTGGATCGA AGATCTGGTG TCCTGTATGG GGGCCTCAAG GTCTTGGAGC AAGACAGTCT CAATGTTGTA TGGGCTTGGG 000560
000561 ACCTGCATCT GGCCCCAAGC ATCTGGAACT GTGCACTTAA CCTTTCTTCA TTACCCAGAC TTGGATGGCC TTGTTGGGGT 000640
000641 TCAAGGGATA GGTCCTCTGT CTCTTCCTTT AAATTATTAA CTATTTATTA CATCCGGAAC CTGTGAGATT CAGCACTCCC 000720
000721 AACCAGACCC TGGGATGGGT GAGAGAAAAG CGGGGGTGTC TCTCCCCTCC CCACTCTGCC CAGCTCTCAT CACTGTCAGA 000800
000801 CCCACCAGAG CTGAGGGCGG AGGGATTGGG GGCTGGGGCA GCCTGGGTCC CCATGCCCCT CTCTGTGCCT CGGTCTCCCC 000880
000881 CCTTCCATGG TGGGCGGGGG GGAAGCTCCA TTCTTAACCT ACCTCGTTTT GGGGAGGGGT GGGACGGGGG ACCAGAGTGC 000960
000961 TGTACGGTGC TGTGGGATCT GCAGATGAAG CGGTGGGGGC TAAGGAAAGG TCCCCTGGCC GCCACTTCCC AGCAGCGCCT 001040
001041 CTCCCAGGTC CCCCAGTCCT GCTCCCTGCT GAGACCCACC TCTGATCCAT GATTCCCCTT CATTGCCCCC AAATCAGGGG 001120
001121 TACATGGAGG GCCGCCCTGG GAGCCAGGCA GACCTCAGAC CCTGGAGCCC CCAGGCCCAA TTTCCCAGCC GCTTGCCCCT 001200
001201 CAGATCGGAT GCTTGGCCCC CAGATTTGGG GGAGGCACCC CAACATATAT CTTCCTGATC TTGTTTCTAA GCCAGTCTGT 001280
001281 GACCTCAATA TTGTTAGTGT CAGTGCAGGC TGAAGTGGTG GGGGAGGATG GGGGCCAAAG ACCCAGCCTT GTCATCGGGG 001360
001361 GAGGGGGCAC GAGATCTGCT CCAAGAAATG TCTGTGACAA AGTCTCAGCC TGTGTTATTT ATTTGCCTCT GTGCACCCCA 001440
001441 CCCACTCACC TTCCTGAACT GCTAAACCAG TCTCCTACTT AAATTCTCCC TTCTCCCATC AGACCCTCAA GCTGAGTTTT 001520
001521 ATAAGACACT CAACAAATGC ATTTATTGAG CACCTAATTA TGTGCCAAGC CCTGTTGAAA GCACTGGAGA TAAAGCAGTG 001600
001601 GGCAGAACAG ACAAAAGTCC CTCCTGCAAA GAGCTTATGA GCTTTATAGT AGGGGAGACA ATAAGTAAAT GACTTAATAT 001680
001681 GTTAGAAATG ATAGAAAGCA G
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Predicted Small Protein

Name ENST00000588453.1_smProtein_11:241
Length 77
Molecular weight 8793.9275
Aromaticity 0.197368421053
Instability index 71.65
Isoelectric point 6.23858642578
Runs 12
Runs residual 0.0164851784634
Runs probability 0.0342548430784
Amino acid sequence MFSPSINPFSSYLFIYLFIYFETESRCITQAGVQWHNLGSPQPPPPGFKPFVCLSLPSSW
DNRHVPPHPANFLYFE
Secondary structure LLLLLLLLLLHHHEEEEEEEEELLLEEEEELLEEEELLLLLLLLLLLLLLEEEELLLLLL
LLLLLLLLLLLLEEEL
PRMN -
PiMo -