ENST00000589396.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000589396.1 |
Source |
Gencode19 |
Same with |
NONHSAT068049 |
Classification |
intergenic |
Length |
645 nt |
Genomic location |
chr19-:56088136..56088780 |
Exon number |
1 |
Exons |
56088136..56088780 |
Genome context |
|
Sequence |
000001 CAGAAAATAT GTGGCCCTCA ACCAAGCAAG AAGCCGGTGA AGGCTGGGTT GAGAAGAAAC AGGAATGTGA GAAGATAGAT 000080
000081 CATCGTCACC GCTGCCCTGT GGAAGCTCCG CGCGATTATC CTCACCACTG CCCTGTGGAA GCTCCGCGCC TTACTCAGTC 000160 000161 AATCTCTACC ACACCCTTAC TCTGTGTCAG CGGTGGTACT AGGCACTGAG GAGGAGTCCA ATACCTTCCT CTGAAAGAGC 000240 000241 TGGAATTCTA GCCCTGCATT GTCCAACATA ACTTTTTTTT TTTCTCAGAA AAGTTTCCAT AATCTTTCTT CCCTCACTCT 000320 000321 GTTGCCCAAG CTGCAGTGCC GTGGTGCAGT CATAGCTCAC TGCAGTCTCA AACTCCCAGA CCCAAGCAAT CCTCTTAGCC 000400 000401 TCTCAAGGAG CTAGGACTAC AGGTGCATGC CACCACACCC AGCTGATTGT TTCATTTCTT GCAGAGACGG AGTCTTGCTA 000480 000481 TCTTGCCCAG TCTGGGAGAA CTTTTTGTGA TGATGGGATA TTCTACATCT TCACTGTCCA ATATGATATC CAGCAGACAC 000560 000561 ACGTGGCTAT TTCCGTTTAA ATTTAGAATA TGGAAATGTA AAGACATTAA GATGAAATAA ATGTAAAAGT TCGGTTCCTC 000640 000641 AGTCA |
Predicted Small Protein
Name | ENST00000589396.1_smProtein_8:208 |
Length | 67 |
Molecular weight | 7532.4365 |
Aromaticity | 0.0454545454545 |
Instability index | 58.4651515152 |
Isoelectric point | 6.94879150391 |
Runs | 9 |
Runs residual | 0.0142442387951 |
Runs probability | 0.0310800997076 |
Amino acid sequence | MWPSTKQEAGEGWVEKKQECEKIDHRHRCPVEAPRDYPHHCPVEAPRLTQSISTTPLLCV SGGTRH |
Secondary structure | LLLLLLLLLLLLLEELHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLEEEE LLLLLL |
PRMN | - |
PiMo | - |