ENST00000589396.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000589396.1

Source

Gencode19

Same with

NONHSAT068049

Classification

intergenic

Length

645 nt

Genomic location

chr19-:56088136..56088780

Exon number

1

Exons

56088136..56088780

Genome context

Sequence
000001 CAGAAAATAT GTGGCCCTCA ACCAAGCAAG AAGCCGGTGA AGGCTGGGTT GAGAAGAAAC AGGAATGTGA GAAGATAGAT 000080
000081 CATCGTCACC GCTGCCCTGT GGAAGCTCCG CGCGATTATC CTCACCACTG CCCTGTGGAA GCTCCGCGCC TTACTCAGTC 000160
000161 AATCTCTACC ACACCCTTAC TCTGTGTCAG CGGTGGTACT AGGCACTGAG GAGGAGTCCA ATACCTTCCT CTGAAAGAGC 000240
000241 TGGAATTCTA GCCCTGCATT GTCCAACATA ACTTTTTTTT TTTCTCAGAA AAGTTTCCAT AATCTTTCTT CCCTCACTCT 000320
000321 GTTGCCCAAG CTGCAGTGCC GTGGTGCAGT CATAGCTCAC TGCAGTCTCA AACTCCCAGA CCCAAGCAAT CCTCTTAGCC 000400
000401 TCTCAAGGAG CTAGGACTAC AGGTGCATGC CACCACACCC AGCTGATTGT TTCATTTCTT GCAGAGACGG AGTCTTGCTA 000480
000481 TCTTGCCCAG TCTGGGAGAA CTTTTTGTGA TGATGGGATA TTCTACATCT TCACTGTCCA ATATGATATC CAGCAGACAC 000560
000561 ACGTGGCTAT TTCCGTTTAA ATTTAGAATA TGGAAATGTA AAGACATTAA GATGAAATAA ATGTAAAAGT TCGGTTCCTC 000640
000641 AGTCA
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Predicted Small Protein

Name ENST00000589396.1_smProtein_8:208
Length 67
Molecular weight 7532.4365
Aromaticity 0.0454545454545
Instability index 58.4651515152
Isoelectric point 6.94879150391
Runs 9
Runs residual 0.0142442387951
Runs probability 0.0310800997076
Amino acid sequence MWPSTKQEAGEGWVEKKQECEKIDHRHRCPVEAPRDYPHHCPVEAPRLTQSISTTPLLCV
SGGTRH
Secondary structure LLLLLLLLLLLLLEELHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLEEEE
LLLLLL
PRMN -
PiMo -