ENST00000590826.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000590826.1 |
Source |
Gencode19 |
Same with |
NONHSAT005119 |
Classification |
intergenic |
Length |
574 nt |
Genomic location |
chr1+:110951592..110958894 |
Exon number |
3 |
Exons |
110951592..110951780,110954795..110954915,110958631..110958894 |
Genome context |
|
Sequence |
000001 GCTTAGTCCA GCCTCAGCCT TCTAGGTTCA AGCGATCTTC CCACCTCAGC CTCCCAAGAA GCTGGGACTA CAGGGACCCG 000080
000081 CCACCCCACC TAGCTAATTA AAAAAAAAAT TGTAGAGATG GAGTCTCAGT GTGTAGCCCA GTCTCAAGTG ACCCTCCCTC 000160 000161 GTTGGCTTCC CAAAGCGCTG AGATTGCAGG AAGAGTGTCT TCATCTCTGC ATCCCTAGTG CAACAGAGCA TGACAAAAAT 000240 000241 TCAACAAATA TTTATTGAAG AGTCTTGATG TCTTTTGGGA AAGGAACTCT ATGGTTACCT TTACTCTAAG ATTAGATGGG 000320 000321 TGTTACTGAT TCTTACCTCA GAGAAGAGAA TGTCATGGAG ACAAAATGAC CTGCTTAGAG TTCTGCACCC CCCAGCATGG 000400 000401 AGAGCAGAGC GCAAAGATTT CTTCCGGACT CCCACATTCC CCTTGGAATC CAAGAACTGG TCTACTGTCA CAACACTTTA 000480 000481 GTACCCTCTT GTAAGCCTGT GGACAAATCC TCTGATGCCT TGATACCTCG GTTTTCCCCC ACTATAAATG GGAAGATAAA 000560 000561 TTCACTAGAA ACAG |
Predicted Small Protein
Name | ENST00000590826.1_smProtein_365:493 |
Length | 43 |
Molecular weight | 4638.2239 |
Aromaticity | 0.0714285714286 |
Instability index | 54.2714285714 |
Isoelectric point | 6.80279541016 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0413354531002 |
Amino acid sequence | MTCLEFCTPQHGEQSAKISSGLPHSPWNPRTGLLSQHFSTLL |
Secondary structure | LEEEEELLLLLLLLEEEELLLLLLLLLLLLLLHHHHHHHHLL |
PRMN | - |
PiMo | - |