ENST00000591523.1
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000591523.1 |
Source |
Gencode19 |
Same with |
NONHSAT003489 |
Classification |
intronic(AS) |
Length |
1100 nt |
Genomic location |
chr1+:58328127..58346412 |
Exon number |
4 |
Exons |
58328127..58328712,58342403..58342514,58343969..58344115,58346158..58346412 |
Genome context |
|
Sequence |
000001 GGAATACGAA GGGAGAATGA AACAAAACTG CTCCGCTTAG GGAACTTGGA AAGGAAATTG AAAAGGCAAG GCACAGGCTG 000080
000081 GAAGAAAATA TTTGAAAAAG ATTTATGTGA ACTTCTTTCT GGATTATACA AAATATTTTT AGATATTCTT ACAACTCTAA 000160 000161 AATAAGATAA CTCCTTAAAA ATCTAAATTC TACCAAAGGA GAGATAAAGA TGACGAATAC ATTCAAAGAT GCTGAAAATC 000240 000241 ACTTATTTAT TATTAGGAAG TTACAAGCTA AAGCATAATG AGATACCACT ACAACCTACT AAACTGACTA AAATTAATCA 000320 000321 GACTAACCAG GTGTTGGCAA GAAACAGGGA CACTGAGACT CTCACACTGC TGGAAGGAAT GTAAAATGCT AAAACTTCTT 000400 000401 TGGAAATGAG TTCAGTAACT TTTTAAACAG TTGAAAATAG ACCTATCATG CAAACCAGCA ATCCCACTTC CAGGTATTTA 000480 000481 TACAAGGAAA ATGACAACAT ATGCCCACAT AAAGACTTGT GCACAAATGA CCGTAGCAGC TTTGTGATAA TTGCTAAAAA 000560 000561 CTAGAAACTT GTCAAGTGTC CAACAGTTGA CATGCAGGCT GGACATACAG TGGGCCTCGA TTGCTTAGAA GCCAAACTGA 000640 000641 ACTCACCAAG AAAAGAAGAC AGGAGAAACT TCTCAAGAGG AATATCTCCA AATTGCAGGA TCGAATACCA TAAGAGGAAT 000720 000721 TCTGGACTGA AGAGTTATGA AGTCATTTCA GACACTTCCA GACAATTTGT GTTAATTAAA TTCTCACTGG TTGAGTTCCA 000800 000801 TTCTACACTG GAAGAGCATT TTTCCTGGAA AGGCTCCTCA AAATGGACAC CATCAAGAGT CACCTCCTCA GTGAAGCCTT 000880 000881 CCATGGTTTC ATACCACCCA TCCCTATCGG AATGAATGTA TCCTTGTTCT CCGTTATCCC AGTATTTTGC CTGGGCTTCT 000960 000961 GTCACACTAC TTTCAATGTC TATACCTCAG TTATCGAATC GAAAAACAAG AGTCATCAGT CTCTAAGGTC CTTGCAAGCT 001040 001041 TCAAAACTTT ATATTTTTGT CAATTACAAC TGAATAAAGC TGAACAACTT ATTATTTATG |
Predicted Small Protein
Name | ENST00000591523.1_smProtein_842:1072 |
Length | 77 |
Molecular weight | 8579.8997 |
Aromaticity | 0.131578947368 |
Instability index | 45.9223684211 |
Isoelectric point | 8.71368408203 |
Runs | 11 |
Runs residual | 0.00332728372656 |
Runs probability | 0.0574665574666 |
Amino acid sequence | MDTIKSHLLSEAFHGFIPPIPIGMNVSLFSVIPVFCLGFCHTTFNVYTSVIESKNKSHQS LRSLQASKLYIFVNYN |
Secondary structure | LLLHHHHHHHHHHHLLLLLLLLEEEEEEEEEEEEEELLLLLLEEEEEEEEEEELLLLHHH HHHHHHLLEEEEEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii iiiiiiiiiiiiiiii |