ENST00000592107.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000592107.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
1019 nt |
Genomic location |
chr22+:17082838..17096001 |
Exon number |
4 |
Exons |
17082838..17083105,17092548..17092783,17094967..17095068,17095589..17096001 |
Genome context |
|
Sequence |
000001 GGAAATGCGA GAGTCTGAGC CGGGGAGGAG GAACCCGAGC AGCGGCGGCG GCGGCCGCGG CGGCGGGAGC CCCCCAAGAG 000080
000081 GAGGACCGGG ATCCATGTGT CTTTCCTGGT GACTAGGATG TCGTCGGAGG AGAACAAGTG CGTGGAGCAG CCGCAGCCAC 000160 000161 CACCCCCCGA GGAGCCTGGA GCCCCGGCCC CGAGCCCCCC AGCCGCAGAC AAAAGACCTC GGGGCCGGCC TCGCAAGGCG 000240 000241 CTTCCCCTTT CCAGAGAGCC AGAAAGAAAC TCAGCCCACC TGCACCCAGG TGAAATAAAC AGCTTTATTG CTCACACGAA 000320 000321 GCCTGTTTGG TGGTCTCTTC ACACGGATGC GCATGAAATT TGGTGCCGTG ACTTGGATCG GGGGACCTCC CTTAGGAGAT 000400 000401 CAATCCCCCG TCCTCCTGCT CTTTGCTCCG TGAGAAAGAT CCACCTACGA CCTCAGGTCC TCAGACCGAC CAGCCCAAGA 000480 000481 AACATCTCAC CAATTTCAAA TCTGATCTAT TCGGCTTAGC GACTGAAGAT TGACGCTGCC CGATCGCCTC GGAAGTCCCC 000560 000561 TGGACCATCA CAGAAGCCGA GCTTCGGGTA ACTCTCACAG TGGAGGAAGG CAGGAATGTC AGGCCTCTGA GCCCAGGCCA 000640 000641 GGCCATCGCA TCCCCTGTGA CTTGCACGTA TACATCCAGA TGGCCTGAAG TAACTGAAGA TCCACAAAAG AAGTAAAAAC 000720 000721 AGCCTTAACT GATGACATTC CACCATTGTG ATTTGTTCCT GCCCCACCCT AACTGATCAA TGTACTTTGT AATCTCCCCC 000800 000801 ACCCTTAAGA AGGTTCTTTG TAATTCTCCC CACCCTTGAG AATGTACTTT GTGAGATCCA CCCCTGCCCA CCAGAGAACA 000880 000881 ACCCCCTTTG ATTGTAATTT TTTATTACCT TCCCAAATCC TATAAAACAG CCCCACCCCT ATCTTCCTTC ACTGACTCTC 000960 000961 TTTTCGGACT CAGCCCACCG GCACCCAGGT GAAATAAACA GCTTTATTGC TCACACAAA |
Predicted Small Protein
Name | ENST00000592107.1_smProtein_779:838 |
Length | 20 |
Molecular weight | 2174.6266 |
Aromaticity | 0.105263157895 |
Instability index | 57.7368421053 |
Isoelectric point | 9.18780517578 |
Runs | 5 |
Runs residual | 0.0123839009288 |
Runs probability | 0.0254372019078 |
Amino acid sequence | MYFVISPTLKKVLCNSPHP |
Secondary structure | LEEEELLHHHHHHLLLLLL |
PRMN | - |
PiMo | - |