ENST00000595084.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000595084.1

Source

Gencode19

Same with

NONHSAT093516

Classification

intergenic

Length

540 nt

Genomic location

chr3+:181543416..181554667

Exon number

2

Exons

181543416..181543532,181554245..181554667

Genome context

Sequence
000001 GTTGGAGTGC AGTGGCGCGA TCTTGGCTCA CTGCAACCGC CACTTCCCAG GTTCAAGTGG TTCTCCTGCC TCAGCCTCCT 000080
000081 GAGTACCTGA AATTACAGGC GCCCGCCACC ACGCCAGTCT CAATACCTTC ACAGAGGTGA AGAAGCAGCA ACCAAATGAA 000160
000161 TTAGACAGCA ACATGATTCC TAGAGAATGG CAAGACCAAT TCTTCAACTA CTTCTTCAGC ATTTCTGAAA CATATGGAAG 000240
000241 ATGGCCCATT GTGCTCTCTT AATTCTTTGA TAATCTGGAC ATTGACTTTT CCATTATATG ACCTGGGCTT GTGGGCATCA 000320
000321 TGTCATAATG CACCTGTTCA GACATCTCCC TGTACCAATA TGGATCACTT GAAGAGACTC CTTTGCCCCC ATCAAAAAGG 000400
000401 ATACAGTTGT GTATCTCTTC CATTTTTGTT TACAGTGCCT AAAATTATTT GAGCAGTTTT TCACCTCTTC TCTGATAAAC 000480
000481 ACCTTATTAG TCCTTAAAAA GAAAAGAAAA AAGGAAAATA AAACTTTTAT TGAGATCCTA
[back to top]

Predicted Small Protein

Name ENST00000595084.1_smProtein_233:451
Length 73
Molecular weight 8090.4863
Aromaticity 0.0972222222222
Instability index 58.5097222222
Isoelectric point 6.78851318359
Runs 11
Runs residual 0.0118613138686
Runs probability 0.046763340881
Amino acid sequence MEDGPLCSLNSLIIWTLTFPLYDLGLWASCHNAPVQTSPCTNMDHLKRLLCPHQKGYSCV
SLPFLFTVPKII
Secondary structure LLLLLLLLLLLLLLLEEELLLLLLLLEELLLLLLLLLLLLLLHHHHHHHHLLLLLLLEEE
ELLEEEELLLLL
PRMN -
PiMo -