ENST00000595595.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000595595.1 |
Source |
Gencode19 |
Same with |
NONHSAT139982 |
Classification |
intergenic |
Length |
795 nt |
Genomic location |
chr10+:75385754..75386548 |
Exon number |
1 |
Exons |
75385754..75386548 |
Genome context |
|
Sequence |
000001 ACCAGCTCTC GCGACACTTT CCTTGGCCAT GGCGAGAGCA CACGAGAAGA GACTCTCGCA AGAAAGTAAA TGAGTCAGGC 000080
000081 TGGAAACAGC GAAGTATATC TCGCGATAGC ACTGTTTAAA ATGGCGGCTT CAAGGCGTTT CACGGGTGTC CCGGACAGGC 000160 000161 GTGGAGGTGG GGCGCAGGCG AGGATGAAGC TTGAGTTGGC CAGGAGTCGG AAAACGATTG CAGGCGGGAC CGCGTCCGTC 000240 000241 GGGGCTGAGG AAACTTAGCG TGGCAGACCC TAAACTGGGA TAACTTTAGG GATATGGCCT TCTTTTCCCA GTTGCCTCAA 000320 000321 ACTTAGAGCA GCGTCGTCTT TAGCCGAAGA TTCATTTTCC CAGCATTTTC CTTCTCCAGG CGGAGTAGTT GGAGACAGAG 000400 000401 GGCAAGCCAG AAACTGACCT TCCCATCTCC TCATTCCCTT CCATCAAGAA CTTTTCATCG TTCTTTCCCC ACCCTGGTTT 000480 000481 GTAAATGGTA TTTGGCTTCA TAAAAACGTT TGTCCACAGG TGCCCTGCTC CATCAGTTCG CTCCAGCAAT ATAGGAAGTT 000560 000561 ACCAAAAAAA AAATTTTTTT TTATTGACCT TGGATGCAGA AAGGAACCGC GTTGGTGTGT GATTTGAATT TTGGACTTCT 000640 000641 TGTTTCCTGC CTTGTGGCCA CGTCCCCCTT ACTTGGTGAC TCTCAGCACT TAGTTGTGGG GCTTTTTCTC TCTGCTCTCA 000720 000721 GACAACTATA AAAGCAGACT AATTGAACAG CATCTAGAAC AGAAGGTGGA TGTAAAGAAC ATTGGTCGGC CGGGC |
Predicted Small Protein
Name | ENST00000595595.1_smProtein_593:730 |
Length | 46 |
Molecular weight | 4742.6243 |
Aromaticity | 0.0444444444444 |
Instability index | 41.7911111111 |
Isoelectric point | 6.49224853516 |
Runs | 8 |
Runs residual | 0.0155303030303 |
Runs probability | 0.0377362656774 |
Amino acid sequence | MQKGTALVCDLNFGLLVSCLVATSPLLGDSQHLVVGLFLSALRQL |
Secondary structure | LLLLEEEEEELLLLEEEEHHHLLLLLLLLLHHHHHHHHHHHHHHL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooo |