ENST00000595595.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000595595.1

Source

Gencode19

Same with

NONHSAT139982

Classification

intergenic

Length

795 nt

Genomic location

chr10+:75385754..75386548

Exon number

1

Exons

75385754..75386548

Genome context

Sequence
000001 ACCAGCTCTC GCGACACTTT CCTTGGCCAT GGCGAGAGCA CACGAGAAGA GACTCTCGCA AGAAAGTAAA TGAGTCAGGC 000080
000081 TGGAAACAGC GAAGTATATC TCGCGATAGC ACTGTTTAAA ATGGCGGCTT CAAGGCGTTT CACGGGTGTC CCGGACAGGC 000160
000161 GTGGAGGTGG GGCGCAGGCG AGGATGAAGC TTGAGTTGGC CAGGAGTCGG AAAACGATTG CAGGCGGGAC CGCGTCCGTC 000240
000241 GGGGCTGAGG AAACTTAGCG TGGCAGACCC TAAACTGGGA TAACTTTAGG GATATGGCCT TCTTTTCCCA GTTGCCTCAA 000320
000321 ACTTAGAGCA GCGTCGTCTT TAGCCGAAGA TTCATTTTCC CAGCATTTTC CTTCTCCAGG CGGAGTAGTT GGAGACAGAG 000400
000401 GGCAAGCCAG AAACTGACCT TCCCATCTCC TCATTCCCTT CCATCAAGAA CTTTTCATCG TTCTTTCCCC ACCCTGGTTT 000480
000481 GTAAATGGTA TTTGGCTTCA TAAAAACGTT TGTCCACAGG TGCCCTGCTC CATCAGTTCG CTCCAGCAAT ATAGGAAGTT 000560
000561 ACCAAAAAAA AAATTTTTTT TTATTGACCT TGGATGCAGA AAGGAACCGC GTTGGTGTGT GATTTGAATT TTGGACTTCT 000640
000641 TGTTTCCTGC CTTGTGGCCA CGTCCCCCTT ACTTGGTGAC TCTCAGCACT TAGTTGTGGG GCTTTTTCTC TCTGCTCTCA 000720
000721 GACAACTATA AAAGCAGACT AATTGAACAG CATCTAGAAC AGAAGGTGGA TGTAAAGAAC ATTGGTCGGC CGGGC
[back to top]

Predicted Small Protein

Name ENST00000595595.1_smProtein_593:730
Length 46
Molecular weight 4742.6243
Aromaticity 0.0444444444444
Instability index 41.7911111111
Isoelectric point 6.49224853516
Runs 8
Runs residual 0.0155303030303
Runs probability 0.0377362656774
Amino acid sequence MQKGTALVCDLNFGLLVSCLVATSPLLGDSQHLVVGLFLSALRQL
Secondary structure LLLLEEEEEELLLLEEEEHHHLLLLLLLLLHHHHHHHHHHHHHHL
PRMN LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooo