ENST00000595627.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000595627.1 |
Source |
Gencode19 |
Same with |
NONHSAT088469 |
Classification |
antisense |
Length |
950 nt |
Genomic location |
chr3-:15480706..15482067 |
Exon number |
2 |
Exons |
15480706..15480884,15481297..15482067 |
Genome context |
|
Sequence |
000001 GGGGAGGGAG AGGCCATATG AGTGGAGGGA CCTGTGGAGG AAAAATTATT ATTACTACCT TGATGTCCGC TGAACCAAAG 000080
000081 TGGATGGAAA TTTCTCAGGA CATATTCATC CAAACTACAA AAACAGGTTA CTCCATACTG ATTACAGGAT GATTTATCAC 000160 000161 ACATTCATTA AATATAGAAC ATTGACTAGC AACCAGTTTC CTCCAACAAC AGATCCATTT GGAAATGGCA CACTGTAGAA 000240 000241 GGCAATCTTG TGACTTCCTT CTAGTTGTAT ATAAAAAATA CAAATCGGTC AGGGAGTCAG GTACAAAACA GTGGTACAAA 000320 000321 AGCATGAATA GATACGCCTT ATCAAAGAAT GTGCTCATTT CATATTGCAG AACTTCTATC TAGATTCTGA TTTTTAGAAA 000400 000401 CTTACTGCTG GTTCATTTGT TCGGAGAGGT TTCTTCACAC CTCTCTTCCA CTCCTACCTC CCCTTGCTAA AATCCACTGA 000480 000481 CTGAAGAATA CTTAGTATGG ATCCACATGG AACCAAAATC CCCAACTGAA TGGAGTCACA TGCATCAGCA CAGTGGCTAC 000560 000561 CGGTTTCATC TGCTCACCCA GCCTCATGTA TTTAGGGACT GAATTCAAGC TAGAAGCACC CAACACTTTT GTCTTTTGGA 000640 000641 ATCTAATCCA AGTGCCAATG TACATCTAAA AGTCCCATGT ATAGGAATCT CTTGATTCCT ACAAATGAGA TTCAAGGGAG 000720 000721 AGAACAGTGA GGAAAGCCCA GAGAGGGGGC AGGAGACTGG CCACAAGCCA GGTCTACTTA AACTTTGAAA GATGAGATTG 000800 000801 TTCAAAAATG ACACGAGAAA ATCACCCATC ACCACTAAGT TAAAGACTTG AATATGTGAG AGTTCCAGAG CCTCAAACTC 000880 000881 CTACTACAGT CACTGATCCA TAACATTTTC CTCTTGCAAT GGACTCCACG CCAAAGTAGC TCAGTCTTGC |
Predicted Small Protein
Name | ENST00000595627.1_smProtein_224:382 |
Length | 53 |
Molecular weight | 6241.2779 |
Aromaticity | 0.134615384615 |
Instability index | 50.5115384615 |
Isoelectric point | 9.96075439453 |
Runs | 9 |
Runs residual | 0.0227075184702 |
Runs probability | 0.0414532179238 |
Amino acid sequence | MAHCRRQSCDFLLVVYKKYKSVRESGTKQWYKSMNRYALSKNVLISYCRTSI |
Secondary structure | LLLLLLLLLLEEEEEEEELLLHHHLLLHHHHHHHHHHHHHLLEEEEEEELLL |
PRMN | - |
PiMo | - |