ENST00000596112.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000596112.1

Source

Gencode19

Same with

NONHSAT147764

Classification

intergenic

Length

1845 nt

Genomic location

chrX-:146990949..146993335

Exon number

3

Exons

146990949..146992513,146992799..146992902,146993160..146993335

Genome context

Sequence
000001 CTCTTCAAGT GGCCTGGGAG CGCGCGCATG CGCGCTGCTG GGAACCGGCC GGGGTGCCGG GTCGAAAGAC AGACGCGCGG 000080
000081 GCCGGGCGTG CGCGGGCTTG GTGGAGGGCG GGAAGGCTGA AGGGCGGTGA CAGGTCGCAC TGCCTCGCGA GGGCCAGAAC 000160
000161 GCCCATTTCT GCAGAGGCAG AAGGTGAGGC GTCTACGCCC TCTCTCACCA GATTTTGGGC GGCCCTGTGG AGACACCCTG 000240
000241 TGCCCTTTAA GGGACATGGA TTGAGTCGGG ATCTCAAAAT CTGCCTTAAT CCATGTTCCC TTCGGGATGC TGGTATCCAA 000320
000321 CTGAGAAGTT GACGGAGCAT CTATCGTGTG CCAGACACTG TGCTAAGTGC TAACGAGAAA TCGGTGAGCA AAACAGAAAA 000400
000401 GAAAAAAAAA GAAGAAACGA CTGCCAGCAT TGAACTTAGT ACCTAGCAAA GTAGGTGGAC ATAAATCAAA TTGTCAGACA 000480
000481 AGTAAATGAG TAGTTGCAGC TGTGATAAGG GGTATGAAGA ATAGGCGCTT CCATGATGGC GGAACATGAC CTAGTCTGGG 000560
000561 GTGGAGAAGG GGAGATGATT CCAGCTGGAA TATGGCAGGT GAGAGTTAAC TAATAGCACT GAGTTGGCAG AGGCAGGATG 000640
000641 ACCTGCCCCA GGCAGGTGCC CCAGAATGAG AGGATGTTGC TGCTGGTGGA ACTCCAGCTT TAAAGCGGTG GATCTAGGGC 000720
000721 CACATTCCTC AAGGCCATAG CAAACAGGAA AGACCTTTTG GACTAGGGTC TTTGGAGTAG TCACATGAGG CCAAGAACCC 000800
000801 AATAGGGCTG AAAGAGAATC TCATCATAGG CTGAATGGGA GCAGAGCATT AGCTGCAACT CCAATGTATT ATAGTAAAAG 000880
000881 GGGACACATT GATTAGAATG ATTATACCCC TCCAAGTGTA AGCTGTTGTT CAATTTACCC AGGGCTTAAA AATATGTCAA 000960
000961 CTCTTCACAA CCATTTTTAC TACAAGCCAC ACTCAACCTG TGTTGTTCCC TGAACCTGTG ATGCACTTTC ATCCGTTCAT 001040
001041 GTCTCTACAC ATCCTTCCTG GGCCCCATAG AGGCCCTGCA CCTTAAGGTT TTCAGCTGGA TTCCTATTAG CTAGTTATTT 001120
001121 TATCTCAGGT ACAGAGAGTT AACTTTGCTC CTCAATTTTC AGCACATTGT CATATCAGTC CCTACAGGGT CCTTGTTTAC 001200
001201 ATTATTTTAT AGTGTTTATA TTATTTTTTC CTCATCTTTC TCGATCCCCA CTCTCATTCT TCTAGACACA AGCTGCAATA 001280
001281 TGTTCGATAG AGATCCTTGA TAATTTAACA CAGATAATGT TTTGTTTATG CCTCTTGCAT TTACAGAGAT GGTATTGGAC 001360
001361 TGTAAATCTC TATTTCCCAC TGTTTTACTC AACAGTCTGT TTTTGAGCTA TACCCACATT GCTGTGTGTA CACCTAGTTT 001440
001441 GCTACCGAGT ATGCCAGAAA TTTTATTCAT ACATATCCCT ACTGATCGGG CATCTAGGTT ACTGCCAACT CCCTGAAGTC 001520
001521 ATACTGTGGT GAAAACCCTT GTGAATGTCT TTACAAACCT TTGCCAGAAC TTATTTTGTG CTCTTGTAGA ACTTTGTGCA 001600
001601 TACCCTCTGC TTCCTCATTA CACTGCTTGG CATATAGCAG AGACTCAACA AATGTTGAAT ACCTCTACTA TGATGGTTAG 001680
001681 TGTACTAGAA TAATTTATTT ATATTTCTGT TTTCCTTATT GGATTATTAG TACCTTCCAG ACAGGGCAAA TGTCTTTTCT 001760
001761 ATCTTTGTGT CCCTGGCACA TTAAAAGTGG TTGATTTCAA GGTATGTTCA ATGAATGAAT AAATACTTAT CTTCACTGCC 001840
001841 AGTAC
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Predicted Small Protein

Name ENST00000596112.1_smProtein_1316:1405
Length 30
Molecular weight 3708.4393
Aromaticity 0.310344827586
Instability index 63.0555172414
Isoelectric point 7.73773193359
Runs 6
Runs residual 0.0073275862069
Runs probability 0.000853794971442
Amino acid sequence MFCLCLLHLQRWYWTVNLYFPLFYSTVCF
Secondary structure LHHHHHHHHHHHHHHHHHHLLHHHEEELL
PRMN LLLLLLLLHHHHHHHHHHHHHHHHHHLLL
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