ENST00000597787.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000597787.1

Source

Gencode19

Same with

NONHSAT106906

Classification

intergenic

Length

2469 nt

Genomic location

chr6+:2988933..2991401

Exon number

1

Exons

2988933..2991401

Genome context

Sequence
000001 AAAGCGACAG GGTGAGTCGC AGGGCACAGT GTGGGATGAG TCACCGACAG CAAGGCATGG ACTCCGGGAA GAAGGGGAGA 000080
000081 CGAGCCGGGA AAGACTTGCA TCGGGGATGT GAGCTGAGCT GCACCCAGAC AAAAGCGGCT CGGGGCTCCT GAAAGCAGCA 000160
000161 GGCACCGCCG GTCCTGCCAA GGGGCTACTT CCTGCGCGGA GTAGGAGAGT AGGAGACCCC AGGCCAGTCC CAATCCCCGG 000240
000241 CCCGTCCGGG ATGAGGGGGG CTGCGGGAGC TGCGGGGGCC TCCTCCAGGG AGGACGGTTG CAGGGTCCCT CGGCCGCCGC 000320
000321 CCACTCCCGG GGGCGTTCCT TCCTCCCAGC TGCGCCCGGA GCGCCTGCTG CCTGGCGAGA GCCCGCCCCT CTGCAACCAG 000400
000401 CCCGCTGCAG CGGAGGGCGC CTGGGTGCCC TCGGCCGAGC CAGCAGCCCA CGGTCGGCGC CGCACTGTCC CCTGGTGGCG 000480
000481 GAGCGCTCCC GCGACCCGGC TCGCCACGCC TGGGAGGGGT CCAGGAGGAC GCGGCTGGGA CCTGGGGGCT CTCAGGGTGG 000560
000561 GGCCTTGGGG GATGAGGCTG GGGCCCGCGG GAAACCGGGC TGGGGCGAGG AGGCTCGCAG GACTTCCTGC CACAGAATGT 000640
000641 TTCGATGCTT TTTTTAATTC TGCAAATGTA AGCCTTTCCA CTTTAAGTCC AAGCTCAGCG CAGAGGACTG TTCTATAATA 000720
000721 CATACAATTT AGTTTAAAAA TGTTGCAAAT GTTAACATGT GTCACAAACT CAAGCAATCC AGTATTATAG AAAGCAAAGA 000800
000801 ATGAAATGTG CTGCTTCTTT CTCCCCCAGA CGCCCTTGCA TACATTAAGA TATGTATATA TGGAAATGTT ACCGGGAGTC 000880
000881 CCGGTTATCC CAAAAAGGGT TGTTTCCTGT TGCGTGGTGA GGCCAATGCA CGAAACCGAA AGGGAGTGTG TCAAGCAGTG 000960
000961 CAGGCTGTAT TCAATGGCTA TGGAATTGGA AGATCTGAAA TCAACTTAGC TTGTGAGAGC TGGGAAGTTT CAGAGGTAGG 001040
001041 GTGTCTTTAA TGAAGGGGCT GGGCATTAAG AGCACGGGGG GGAATATTCG TGCTTTCCTT GGGAAAGAAC GGAGATTTTT 001120
001121 CCCGGAATCA AGAAACCCCT TTTTTTCTGT CCCTTCTTGG TCTCTTCCAG TCGTTGTCAT GGCGACATGT TGTTTAGCAT 001200
001201 GAGAACAGGA TGATGATAAA GCCAGAGGCT CTTCAGAGGC GCCATCTTGG ATTTCGCCAG CTTCAGCTGG TTTCGTCCTA 001280
001281 AGAAGGAACT TCGAAACACA GGCATTCTTT TTCCTGAAAA TAAGCAGAGT TACAGCTGAG TAGGAATTTA GCTCTGTCCC 001360
001361 ATATGCTATC GCATTGGGCA GCAAAAGCAG GGTGGGGTCC AGCGAAATCA GCAGGCACTG CAATGAGTAA CATACCCAGC 001440
001441 CACGTTTATG CAGCATTTTT ACGAAAATGA AACCATACTA CCTGTAAAGG AAGATATGCT AACAAACAAC AAAACTGGCA 001520
001521 GGAACCAAGA TTCCTACTGA CACTACCCTT AGTTTTAATT TTCCCTGACA ACAAATGAGG TTAACAGAGC ATAATTATCT 001600
001601 ACCGTGACCC CTTCAAAAAG ACAGGCTGTA TACATTTGCA CTAAGAGAAG AAATCGTGTA ATGTCAGCAA ATTTCCCCCA 001680
001681 CTTAAAGCTT CTCTATTTAA AAAGCTTCAC GCACACATGC ACGCATATGT CTTCAAGATG ACCACAATTT ATTTTGCAGT 001760
001761 CATTCTTTGC ACCAGTTCCC AATTTTTCCC ACTAGCTTGC AAGCTCCGTG ACTCGAGGAG ACCGGGGGAT CAGAGTTTGT 001840
001841 TTTTGCGGAG AAGTGAGTCC TTTATGCCCC AAATAGTGAC TGACATAGAG AAGGTACTCA GTAAACACTT TTTAAAGGAA 001920
001921 TGCCTGCCTG ACTGAAGCTT AATGATGTGA GGCTTCTAGT GGGATACCCT ACCTTGTTTT AACCTGAAGT GACTCTTCCT 002000
002001 TAGCTAAGAG AGCCAGACGG ACTCCATCGT GACTCCTTCA CTCGCAGCCC CTTACCCACC CCCTTCCTCA AGGACTTAAC 002080
002081 TTGTGCAAGC TGACTCCCAG CACATCAAGA ATGCAATTAA CTGATAAGAT ACTGTGGCAA GCTATATCCG CAGTTCCCAG 002160
002161 GAATTCGCCC GGTTAATAGC ACCCAGAGCC CCTGCGTTTG TGTCCGGTTG ATAACGCCCA AAGCCCGGCG TCCATCACCT 002240
002241 TAGGATAGAC TTAAAGCCTC TGCACCTGGA ACTGTTTACT TTCCTGTAAC CGTTTATCCT TTTAACTTTT TGCCTACTTT 002320
002321 ACTTCTGTAA GATTGTTTCA ACTAGACTCC CCCTCTCCCC TGTCTAAACC AAAGTATAAA AGAAAATCTA GCTCCTTCTT 002400
002401 CGGGGCCAAG AGAATTTCGA GCGCTAGCTG TCTCTCGGCT GCCGGCTAAT AAAGGACTCC TGAATTCGT
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Predicted Small Protein

Name ENST00000597787.1_smProtein_1049:1201
Length 51
Molecular weight 5504.4798
Aromaticity 0.12
Instability index 64.828
Isoelectric point 10.3101196289
Runs 9
Runs residual 0.0153216374269
Runs probability 0.0464287817229
Amino acid sequence MKGLGIKSTGGNIRAFLGKERRFFPESRNPFFSVPSWSLPVVVMATCCLA
Secondary structure LLLLEEELLLLHHHHHLLLLLLLLLLLLLLEEEELLLLLLEEEEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH
PiMo i?????????????????????????????????????????????????