ENST00000598137.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000598137.1

Source

Gencode19

Same with

,

Classification

intergenic

Length

575 nt

Genomic location

chr19+:21155068..21166016

Exon number

2

Exons

21155068..21155323,21165698..21166016

Genome context

Sequence
000001 CCAAACAGGG GACTTTAATA TACCTGGGCC CCACACCTAG GTGATGTGAC TCTTCTGCTG GGCCTCGACC ATAAGAGAGA 000080
000081 TTGCGATATA TACATGGGCC CAGCCTTCAG GTGATGTAGC TCTTCTGCCT GAGCCAGGCT CACAGGGGGA ATTGTAAGAT 000160
000161 TTAGCTGGAC CCAGCTCACA GGCAATGATG ACTCTCATAC CTGGACCCAG TGAAGAGGAG ACATTCTGAC TCTCATAGCT 000240
000241 AGCCTTAAGG AAATAGAGAA AGTGCAAGAA CCACCAGGTC TTAGGGCACA TGGCCAGGAC CAGGAGGTAC CCAGTGAAGT 000320
000321 GCTCTAATGT GGTCCTGTCC CACAGCCCCT GAACCAAATA AGGACAAGCA GAACCTGAAA CCAAGGAAGG CTTGGGAACT 000400
000401 GCAGACTCCA GGACTCTTTA CTAAGACTAA CAGGAGGAAT GAAGGCAAAG ATCAGATACC TGCAGGGTTG AAACCGTACC 000480
000481 CAGACTTTGG AATTTTAGTG TCTCCTTCTT TACTCTGTGT CCACAGCCCT CTTTAAGAGT GGAGAGAGAA ACATAATAGA 000560
000561 AATACATGAA GAGTC
[back to top]

Predicted Small Protein

Name ENST00000598137.1_smProtein_326:535
Length 70
Molecular weight 7756.8961
Aromaticity 0.0724637681159
Instability index 54.7391304348
Isoelectric point 9.38983154297
Runs 8
Runs residual 0.0233892954513
Runs probability 0.014606518283
Amino acid sequence MWSCPTAPEPNKDKQNLKPRKAWELQTPGLFTKTNRRNEGKDQIPAGLKPYPDFGILVSP
SLLCVHSPL
Secondary structure LLLLLLLLLLLLLLLLLLLLHHHEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELL
LEEEEELLL
PRMN -
PiMo -