ENST00000598560.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000598560.1 |
Source |
Gencode19 |
Same with |
NONHSAT072634 |
Classification |
intergenic |
Length |
784 nt |
Genomic location |
chr2-:98081774..98091784 |
Exon number |
4 |
Exons |
98081774..98082014,98088548..98088677,98088770..98088854,98091457..98091784 |
Genome context |
|
Sequence |
000001 AACATGCTCC TGAATGACTT TTTAATAAAT AATGAAATTA AGGCAGAAAT CAAGAAGCTC TTTGAAAATA ATGAGAACAA 000080
000081 AGTTACAACA TACTAGAGCC TCTGGACACA GCTAAGACAA TGTTAGGAGG GAAATTTATA GCACTAAATC CCACATCAAA 000160 000161 AAGTTAGGAA GAACTCAAAT TAATAACCTA ACATCACAAC TGAAAGAACT AGAGAAGCAA GACAAAACCC CAAAGCTAGA 000240 000241 GGAAGACAAG AAATAACTGA AAATCTGAGC TGAACTGAAA GAAACCGAGA CATGAAAAAA AGAAATTCAA AAGATCTATG 000320 000321 AATTCCGGAC ACTACCCAAA GCAGTGCTTC ACTACAGTGG CAGACAGACC TGAAAATTTT CATCTGAAGC AGCAGAGTGA 000400 000401 ACTGCAGAGG CAGGTCACCA ACCAGTGTGG AGGCTAAAAG CGGGCCTCTT TGGGGATTCC AGGTGGAAGT GTTGGACATC 000480 000481 TGTAGTATTC CTGGTCTCGA ATCATCCTGA TATTCTTCAT TTTGTTATTC ACATTGGACT AGGAGATAGA ATCTCACTAT 000560 000561 GTTGACCAGG CTGGTCTTGA ACTCTTGGCA CCCAAGCGAT CCTTTTGCCT GGAATCCCAA AGTGTCAGAT TTACTGAAGA 000640 000641 ATATTTCATT GTAATTACTT TTTATACTTT ATAGGTCAAG AGCTCTGTTT TAAATACAAA ATTTATTGAA TATACTTTTT 000720 000721 CAAACAAAGT TTCATGTTCT AATCATTGTC TGATTTCAGC ATTAAATGAA ACACAGTAAA GAAA |
Predicted Small Protein
Name | ENST00000598560.1_smProtein_317:436 |
Length | 40 |
Molecular weight | 4478.9166 |
Aromaticity | 0.0769230769231 |
Instability index | 59.3923076923 |
Isoelectric point | 7.84686279297 |
Runs | 6 |
Runs residual | 0.0148944193062 |
Runs probability | 0.0373461696991 |
Amino acid sequence | MNSGHYPKQCFTTVADRPENFHLKQQSELQRQVTNQCGG |
Secondary structure | LLLLLLLLLLEEEELLLLLLEEHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |