ENST00000599486.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000599486.1

Source

Gencode19

Same with

,

Classification

intergenic

Length

2065 nt

Genomic location

chr16+:86320033..86326995

Exon number

3

Exons

86320033..86320155,86324271..86324350,86325134..86326995

Genome context

Sequence
000001 AGGTGCAGCC TCTCCCACGT GCACCTGCGA GGCCTACCCT TTCTCCCGTC TCAGGGCCTT GATGCCCGTG CCTGTGAAGC 000080
000081 TGGCATCAGC GAAGACCTCA GACGGGAAGG GATGAGTGAG CAGGAGTATG AGTACGTGAG TTTCGAATGG AAGCACTGTT 000160
000161 ATGCCAGCAT CAAACACCCT GCATTGACAG AAATGTGATT CCGGCAAGGT AATAACTGCC ACTCCCTGGG ACTGTTTGAC 000240
000241 ATGACTCCAG GACCACAGGG AGTGCATGAG GAAGCTGGCA GTCCACCTGC CACCCACTGT GAACCCAGAC AGAGAGGCCA 000320
000321 TCTGACCCAC ACAGCAATTC TGGGGGACTG GGACCTGCGA GCAAGGTTCG ATTCCCAGCC CATCCGTCCC TGTCTCTCTG 000400
000401 ACACACGGTC ACCACGTGCA TTCTGCTGCC AGGCCCCGGA GCTGAATCCT GTGAAATCCT TGCTCCAGGG GCCACACAAT 000480
000481 GTAACCGGGA GGCAGGAATA TGACAGGAAA AGTTAACCCA CAGGATGGGA GGTCCCAGGC TGTGTGCACA GTGACAGGAG 000560
000561 TGATCACAAG AGTGCATGGG GACTCACCCT GGCCAGAGAC AGAGAGGCAT ATAGGAAGGT TCCCCAGGGG AGCCGAGACT 000640
000641 CTGTCCAGAC CTCAAAGAAT TCGGAGAGGA GAGTGAGAGT GAGCCCGTAT CTGGGATAAC TGAAAAAAAA AAATGACTAG 000720
000721 CTTAAAAAAA AATCTCCATG TGTGACACCT TACGTCACTA AAGCAAAGTG TGGATTTGAG TTACTAGGTA CTAACGAGAA 000800
000801 TTTTGGAAAA TGGACACAGC CCTGCGTTTA AAGGAATTGT CTTTTCTTGC TGGCTGATAC ACTTGTAAAC ACACACACAC 000880
000881 ACACACACCC CACCTGGCAT CTCCATATAA CATCCCAGGG TGCCGTTAGC CTTTCTGCCT CCTCCCTCAT CCCATGTCTC 000960
000961 CTAGAACTGC CATGAAGCTG ACGTGCAGCA TGTGCTCGCT GCTGGGCATA GGTGGCCAGC CCATGGCTCC TTCCTGTACC 001040
001041 CGTTGCTGGC AGGTCCCGTG CCCCGGGGCA GCTCCTGCCA CCAGTCCTCT CCTCTGCCCT CCCTCGCATC TACTCCTTAC 001120
001121 GTGCATCTGT CAAGGGGCGC TGAGCAGGTG TGTCTGTGCT TCACTCAGGT CTCGTTAGTG GTTGTCAGTA AGCTCTGAAT 001200
001201 TCTTCCATAG AACCCTTAAA TCCTTCCTCA ATCCCCACAG CCCACGAGCA AGCCTCCTAA ATCCAATCAA TTAACACAGC 001280
001281 CCAGAAAGTG GATCCATTTG CAGGAAAGCT ATAAGCTTGC ACCTAATCGT CCTTCCCTAG GGGACCGGTT AGAGCAACTG 001360
001361 TAGGACGGCA GGAAGGAGCC CTCTATGGAC CTGAAAACAT CAAGGAGAAC GGTACATGTT GATTGGAAAT ATGTCCGTGA 001440
001441 CATATATTGC TAAGTTTAAA AAACTTAGGC TCCAAAGCAG CAGATGAGTA TGATTGCAGT AGCTTTTGAA ACGGTCGTGT 001520
001521 TGGGTGAGTG TTTATACAGA GATGTCTGGG GCAGGAGAGA GAGGCCTGGG GGCCACCAAA TATTCCCAGC AGTTGCTGAC 001600
001601 AGTGAGACAC CAGGAGGGTT CAATTTTAAA AACTGTCTTC TTTATTTAAA AAACATTTTT TTTCAGTGGT TGAATTTTTG 001680
001681 ACATGGGTAT GCATTGTCTT CATAAGAAGG AAAAGGAAAA AAAAAAAAAA AAAAGAAAAC CAGCTAGGTG ATTTATAAGC 001760
001761 TTCCATGGAG CATTTTTGGT AAATGAGAAG TGCTGGGTTT TCCAGGTAAA TGGAATATGC AAACCATGGG TGCCGGGGCT 001840
001841 GGGAGGAAGT GACAAGAGGG GACACTGCTT AGTTGCGTAG GGTTTCCTTT TGGGGTGATG AAATGTTAGG GAACTAGAGA 001920
001921 GGGCTGATGC GCGTTGTGAT TGCACCGAAC GTTCTGCATT TACTAAATGC CCCCGAATTG GACACTTGGA GACGGTTAAT 002000
002001 TTCCTGTTAT GTGAATTTTA CCTCAATAAA AAGTGCCAGA TTCTCTAGTA AAACAAGTCA CCTAA
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Predicted Small Protein

Name ENST00000599486.1_smProtein_953:1177
Length 75
Molecular weight 7693.2729
Aromaticity 0.0135135135135
Instability index 72.0945945946
Isoelectric point 8.98577880859
Runs 9
Runs residual 0.0210283454186
Runs probability 0.0473610865769
Amino acid sequence MSPRTAMKLTCSMCSLLGIGGQPMAPSCTRCWQVPCPGAAPATSPLLCPPSHLLLTCICQ
GALSRCVCASLRSR
Secondary structure LLHHHHHHHHHHHHHHHLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLHHHHHHHH
LLLLLEEEEELLLL
PRMN -
PiMo -