ENST00000601955.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000601955.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
1123 nt |
Genomic location |
chr3+:195435025..195436458 |
Exon number |
2 |
Exons |
195435025..195435306,195435618..195436458 |
Genome context |
|
Sequence |
000001 AACCTTTGCT GTCTTGGGAC GGATCACCGC TGCAAGAGGG GAAGTTGCTA CTGTGATGAA TTCTGCCATG TGGCACCAGA 000080
000081 CTGCCACCCA GACCACAGTG TCCTCTGCAA CCCTGGTAAC TCACATACAG GCCCGATTCC ACCTACAGCA AAGCTGGATG 000160 000161 CGATGGCTGG CAGAGGCAAA CCCTTTGCCT GCACTTCAGG CCAAAGCCGG GATGTGGCCT AGATGGTTCC TAAGGTCCCT 000240 000241 GACAATCCTG AGATCTTGCA TCTTGTCTAT TTCAGGTCAA AGCTTCTCAG ATGACCAAGA TGGTGCTGCA GATGGTGCTG 000320 000321 AGGATGGAGA ACCCACCAAG CCCCGCTAGG AGCCACCTAG ACTGGATGCA GAGCATGGTG AGCTCCCTGC AGGTTCTCTG 000400 000401 AGAAGGGGTG GATGGCAGCC TGCTCCTTGC CTTTGTGCCC TCCAGGCCCC AAAGTCAGGG AACCAAAAGA AGAAAGGGGC 000480 000481 CGTAGCTAGG GCAGAGCTCC ACTGCAATGA TTGTTTTAGG GGTAGGAGCC AGGATTGCCG TCTGTGGACA CTGAAATTTG 000560 000561 AATCTCATAT ACTTTTGTGA CAAAACATTC TTCCTCTTTT GTTCTTCTCC TACCATCTAA AAATGTAGAA AACATTCTTA 000640 000641 GCCTATGAGT TGCACAAAAA CAGGCAGTGG CCAGATTTGG CCCATAGACC ATAGTTTGCT GACTTCTGCC CTAAATCATC 000720 000721 CTCCATTTCT TTCCTTCTGT GTCCTTGTTA CTGACAAAGC CACTTTCCCT AAAATGGGGT CTTTCCCTGT TTGGTGCCAT 000800 000801 GAAGCCAATA TGCAAAACCG AAAGTGAGCC TCAAGCAGTG CAGGCTTTAT TTGGTGGCCA TGGAATTGAG AAGTGAGAGC 000880 000881 TTGGCTCACA AATCAACTTT TCTGCTCGTG AGACCCAGGA AGTCACAGAT ACAGGGCATC TTTAGTGAAG GGGCTGAGCA 000960 000961 TTAAAAGCAA GGGGAGGAGT GGCCAGGTGC AATGGCTCAC TCCCATAAAC CCAGAACTTT GGGAGGCCAA AATGAGAGGA 001040 001041 TTGCTGAGAC CAGGAGTTCG AGACCATCCT GGTCAACATA GTGATACACC CCCATCTCTA CAAAAATAAA AATGAAAAAA 001120 001121 GCA |
Predicted Small Protein
Name | ENST00000601955.1_smProtein_644:826 |
Length | 61 |
Molecular weight | 6707.7379 |
Aromaticity | 0.1 |
Instability index | 49.7583333333 |
Isoelectric point | 8.61309814453 |
Runs | 11 |
Runs residual | 0.0335992907801 |
Runs probability | 0.035530182589 |
Amino acid sequence | MSCTKTGSGQIWPIDHSLLTSALNHPPFLSFCVLVTDKATFPKMGSFPVWCHEANMQNRK |
Secondary structure | LLEELLLLLEEELLLLHHHHLLLLLLLLEEEEEEEELLLLLLLLLLLLEELLLLLLLLLL |
PRMN | - |
PiMo | - |