ENST00000602420.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000602420.1 |
Source |
Gencode19 |
Same with |
NONHSAT137593 |
Classification |
intergenic |
Length |
751 nt |
Genomic location |
chrX-:73289193..73513307 |
Exon number |
5 |
Exons |
73289193..73289419,73500229..73500329,73500766..73500920,73501537..73501683,73513187..73513307 |
Genome context |
|
Sequence |
000001 GCCTGCTGCT GCCATTCAGG CGTGTCTCTC TCTCTCTCTC TCTTTCATGC CGCTCTCTCC ACCCCATCTT GGGACGGCCA 000080
000081 GCTCTAAGAA TTCCTGCTAC GACACTGAAT TCAACCAGGA GGTGATGCCA CACTCAATCA GAAACTATGC TACTGCTGAA 000160 000161 GAGGTATATT GAGCCCTGCC TGGTTAACCT CCAGTGAGGT TATTAGAGAA TTGGGAGAGG CTCAAATCAG CATCCTGCAC 000240 000241 CTAGTTATCA AACCATTGTG AAGTCTTGAT TCCTGGATGG CCAGAAAACT TGTCATTGGT CAAGAGCAAC ATTAAGATCT 000320 000321 GCCTGTTACT CATACTGATG CTTCCTGCCC AGCAAGTTCA TCAGAGGGCG AGGATGAATT ACGGTTGCCA TGAATGTCCT 000400 000401 TGTGAGGCAG TTGGGAAGCC TTGGCTGGAT TGTGAAGGAT ATTTGAAAAG TATTTTAGAG TCCACCAGAT CATCCATGTG 000480 000481 AGTGACCATG CAGCAAAAGA AGGAGGGTCC TCTCAGTGAT TAAGATAATC AGCAACTGCT GTGATGAGAT GCTGCCTTTA 000560 000561 ATGCTGCTGC ATGTGGTCAA ACCTCCACTC CCAGTCTACC CAGACCAGGA CTTGGCTTCC AGGATCCAGG GGTGTCTGTG 000640 000641 TGAAATGATC AGCCTGGGCC CCCAAGCAGG TCACTCCCAG CACAGAGATG TCATTGATTG TACCACCGTC ATCAGGCTGT 000720 000721 CTTCCGCCCT CAGGGAAAAG TAGCATGTCT T |
Predicted Small Protein
Name | ENST00000602420.1_smProtein_548:742 |
Length | 65 |
Molecular weight | 7092.3394 |
Aromaticity | 0.015625 |
Instability index | 45.984375 |
Isoelectric point | 6.80230712891 |
Runs | 8 |
Runs residual | 0.02359375 |
Runs probability | 0.044018282989 |
Amino acid sequence | MLPLMLLHVVKPPLPVYPDQDLASRIQGCLCEMISLGPQAGHSQHRDVIDCTTVIRLSSA LREK |
Secondary structure | LLLLEEEEELLLLLLLLLLHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLEEEEEHHH HLLL |
PRMN | - |
PiMo | - |