ENST00000602461.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000602461.1 |
Source |
Gencode19 |
Same with |
NONHSAT136802 |
Classification |
intergenic |
Length |
1379 nt |
Genomic location |
chrX-:45604639..45629677 |
Exon number |
2 |
Exons |
45604639..45605528,45629189..45629677 |
Genome context |
|
Sequence |
000001 TCCGGCCACT CTCCTGCCTG GGCTGCTGCT CAACGGGGGC TGGGGGTGTG TGGGGCGGGG GTGGTCTGTC CAGTGATTCA 000080
000081 GCCACATGTG ATAGATGACC AAGTGACTGC TTTCTTGGAG TCCGCACACC AGTGGAAGAC TCTCAAAGTG GTTGTGACCG 000160 000161 ACTTGATCAA ACTCTAGGCT TCCTGAACTG GTAACTGTCA CTTTAATATA GGTTACTGAT TAAACTCAGA AAAATGCAGC 000240 000241 TTAAAATCTT TGCCAGGAAC TTGTGTGGAC TTATTCCCTG TTCCCCCCCC CACCCCCCTT GTTCTGATTT GTTTTGTCAC 000320 000321 AGGAATGAAA TGCAGATAAC TCTTTAGAAA ACTTTTGTAG GAAAAGCGCC TCGTGTGATC TGGAACAAAG ACGTTTTATA 000400 000401 ATCAGATTTA TCAAGCTGCG AAGAGGGAGT TTTAGTGAAC GGAAGCAGCA GCATTCTGTC ACCAGGAAAT ACTCCTTTAT 000480 000481 CCAGAATTGG AGGTATAAAC CAGTGGAGTT TATCATTGAA TAGAGTGCAG AGAAAGGACC GCAAGAAAGC TGATCACCTC 000560 000561 AGCAATGAAT GATTTCAATA CGATTTCACC CAAATGGTCT CACACACCAG CCTAGTAAAC CAGAGATAAG GTGTAATGTC 000640 000641 ATCCTTCCTT CCTTCTCCCT GCCTCAACTG TCAAAGATTG ACAACTTACA TGTTGTTTAC TTTTTGGCTT CTATTTCTGT 000720 000721 TCATAATTAT TATCAGAAGG CATAGCACCC ACAAGCCTAA TCATACTGCC TTACAACCTT ATTCCTCTTC ATTTTGTCTT 000800 000801 CTCACTTACC TGCAGAAACC CAGTTTATTT TTGTTCTCCC TTTACCACAC CAGCCTTGTA ACTGTTATGA ATGACCCTCA 000880 000881 ATCTCACTGG AATCTGAATC ACTCAGGAAT TCAAGCAAAC TGGATGTTTT AACCACTGTT CAGCTTTCTT ATGGAATGAC 000960 000961 AGAGAACTTG TAAAGATAAA ACACCAGTTT GCAGGAAGAA AGGAAGAGAA TGGAAATTGC TTCTGGAAAA TACTAGTTTT 001040 001041 ACAATATGTT TTGTTTGTCT GCTCTCTTAA ATAAACTTAA TCCTATAAAC ATTTTTTAAG AACTAGCCAT TAAGACTGTT 001120 001121 AAGTTCTCAA TTATAAAGGA ATAAAATGTT TTAAGGAGGA TTTATTTGCC CTTGCTTATA TGAACTGCAT ATTTTTAGTA 001200 001201 GGAAATCATG TAATTTAAAT TAGTATTGAT TAACAGATTT AATGTAGAAA ATGGACATAT AAAGAATACA AGGATAAATG 001280 001281 TCTACATGTA ATAATGGATG GTAGTGATAT AATGCATTTT TGTCATCCCA TGCTGAATTC AGTAAAAATA AAGCTAATGA 001360 001361 CTTGGAGCTT TTAAAAGAT |
Predicted Small Protein
Name | ENST00000602461.1_smProtein_635:931 |
Length | 99 |
Molecular weight | 11586.4299 |
Aromaticity | 0.163265306122 |
Instability index | 63.8234693878 |
Isoelectric point | 9.30157470703 |
Runs | 12 |
Runs residual | 0.0165935533092 |
Runs probability | 0.0351086380499 |
Amino acid sequence | MSSFLPSPCLNCQRLTTYMLFTFWLLFLFIIIIRRHSTHKPNHTALQPYSSSFCLLTYLQ KPSLFLFSLYHTSLVTVMNDPQSHWNLNHSGIQANWMF |
Secondary structure | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLHHHHHHHHL LLLLEEEEHHHLEEEEEELLLLLLLLLLLLLLLLLEEL |
PRMN | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLHHHHHH HHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiTTTTTT TTTTTTTTTTTTTooooooooooooooooooooooooo |