ENST00000602577.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000602577.1

Source

Gencode19

Same with

NONHSAT094988

Classification

intergenic

Length

497 nt

Genomic location

chr4+:6241168..6241664

Exon number

1

Exons

6241168..6241664

Genome context

Sequence
000001 CGTTCTGCTC TGTGTGTGTC TTTGTGCCCA TTCTTGTTGG CTTCCTTAGA GGGATTTCTG GAAGTTCAAT GATTATGTAA 000080
000081 AAAGCACAAG CCTTGCTGGG ACCCTGGAGT GGCGTTGGAG TCTCTCGTGG TTAGGAGCCC AGGCCCTGGC CTGGCCATCG 000160
000161 GGGGCTGGAA TCCTGGCTGT GTCCTCCGTA GCCATGTGCC CCAGGCAGCT TTCCTCACCG CCTGCCTGTC ATCCAGGGAT 000240
000241 GCAGGTAGGT CCTGCTCCAT GGGGTTGTCA TGGCGATCAC AGAGACTTGT CCGTGTGGAC CACCTAGAGC AGTACCTAGC 000320
000321 AGGGCACCTG GCGCCCTGGG GTCACCTTGG ATCAGGGTTG CAGCTGACCC ACTCCCATCC CTCCCAAAGG CCCTTCAGCC 000400
000401 CAGACTTTTG TGCACCCCAA ATTCCATCAA AATCCTTTTT CCTTTGAGAG TAACTTTATT CATTTCCCTG CAGCTTATTA 000480
000481 AAGAATTCTG AAGAACA
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Predicted Small Protein

Name ENST00000602577.1_smProtein_269:490
Length 74
Molecular weight 7890.449
Aromaticity 0.0547945205479
Instability index 57.4356164384
Isoelectric point 9.88763427734
Runs 8
Runs residual 0.0345558992488
Runs probability 0.0453541777071
Amino acid sequence MAITETCPCGPPRAVPSRAPGALGSPWIRVAADPLPSLPKALQPRLLCTPNSIKILFPLR
VTLFISLQLIKEF
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLEEEEELLLLLLLLLLLLLLLLLLLLLLEEEELLL
LLLEEHHHHHHHL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHH
HHHHHHHLLLLLL
PiMo oooooooooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTT
TTTTTTTiiiiii