ENST00000602577.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000602577.1 |
Source |
Gencode19 |
Same with |
NONHSAT094988 |
Classification |
intergenic |
Length |
497 nt |
Genomic location |
chr4+:6241168..6241664 |
Exon number |
1 |
Exons |
6241168..6241664 |
Genome context |
|
Sequence |
000001 CGTTCTGCTC TGTGTGTGTC TTTGTGCCCA TTCTTGTTGG CTTCCTTAGA GGGATTTCTG GAAGTTCAAT GATTATGTAA 000080
000081 AAAGCACAAG CCTTGCTGGG ACCCTGGAGT GGCGTTGGAG TCTCTCGTGG TTAGGAGCCC AGGCCCTGGC CTGGCCATCG 000160 000161 GGGGCTGGAA TCCTGGCTGT GTCCTCCGTA GCCATGTGCC CCAGGCAGCT TTCCTCACCG CCTGCCTGTC ATCCAGGGAT 000240 000241 GCAGGTAGGT CCTGCTCCAT GGGGTTGTCA TGGCGATCAC AGAGACTTGT CCGTGTGGAC CACCTAGAGC AGTACCTAGC 000320 000321 AGGGCACCTG GCGCCCTGGG GTCACCTTGG ATCAGGGTTG CAGCTGACCC ACTCCCATCC CTCCCAAAGG CCCTTCAGCC 000400 000401 CAGACTTTTG TGCACCCCAA ATTCCATCAA AATCCTTTTT CCTTTGAGAG TAACTTTATT CATTTCCCTG CAGCTTATTA 000480 000481 AAGAATTCTG AAGAACA |
Predicted Small Protein
Name | ENST00000602577.1_smProtein_269:490 |
Length | 74 |
Molecular weight | 7890.449 |
Aromaticity | 0.0547945205479 |
Instability index | 57.4356164384 |
Isoelectric point | 9.88763427734 |
Runs | 8 |
Runs residual | 0.0345558992488 |
Runs probability | 0.0453541777071 |
Amino acid sequence | MAITETCPCGPPRAVPSRAPGALGSPWIRVAADPLPSLPKALQPRLLCTPNSIKILFPLR VTLFISLQLIKEF |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLEEEEELLLLLLLLLLLLLLLLLLLLLLEEEELLL LLLEEHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHH HHHHHHHLLLLLL |
PiMo | oooooooooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTT TTTTTTTiiiiii |