ENST00000602878.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000602878.1

Source

Gencode19

Same with

,

Classification

intergenic

Length

717 nt

Genomic location

chr6-:72125866..72129964

Exon number

3

Exons

72125866..72126262,72127023..72127146,72129769..72129964

Genome context

Sequence
000001 GCAGATCCCG GCAACTTGCG AACCGGGAAA AGTTTGCGGC GCCTCCGCGG GGCGGCGCGA CGCGGCCCGC CCCTCGCGTC 000080
000081 CGCGGTCATC GCGGGTGACT TTCTCGACTC GTCGTCAGCC GGGGCCGCAG CGCGGCCGGT GGGGACTGCG GGGCGGGCCG 000160
000161 GAGTCCGTCC GAGGGCTCCC GCACCTCGGG CTGCGGGAAC ATTAAAATCT CCCCAGATGC TCACTGCTCT GATCATTTCC 000240
000241 CCTACAGCAC CAGACATGTT GGCATCATCT CTTAGTTGGG CCATGTGGCC AGGGAACCCT TCATGAAACC ACCTCTGCAG 000320
000321 TCCTGGAGAG TTGCTGTAGA AGAAGGAAAA GAGAGGAAGA CAACACAACA CAGGAGGGGA TAAGTACCTC TGGACACAAT 000400
000401 GGAAGTAGTA GTTGTTGAGC AGAGGGAAAG GGATAGGAGA AGGATGTGGA CTGCAGTGCT GCAGTGCCAG GTAATAACTT 000480
000481 TGATCATGTA CCTCCTTGGC TCAGGTGCTG TCTCTTCTAC TCTCCTCCTT ACTTGTACTA CCTTATTTAG CACTTAATTA 000560
000561 TATACTTTCT TGACTCACTT TGAGACACAC TGATTATGTG GTCTGCCTCA AAGACAGAAT CCTAGTTTTG GATTTTAGCA 000640
000641 TTACTGATCT ATAGCCTTGC AGGGGCTTAA GGATGGCAGC TGTCTCTCTC CCTTGGGATC TAGCTTTTGC AAATATT
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Predicted Small Protein

Name ENST00000602878.1_smProtein_398:556
Length 53
Molecular weight 5919.9794
Aromaticity 0.0576923076923
Instability index 46.0153846154
Isoelectric point 7.82379150391
Runs 10
Runs residual 0.041938287701
Runs probability 0.0124183006536
Amino acid sequence MEVVVVEQRERDRRRMWTAVLQCQVITLIMYLLGSGAVSSTLLLTCTTLFST
Secondary structure LEEEEEELLLHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHEEEELEEEELL
PRMN LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToooooooooo