ENST00000602878.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000602878.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
717 nt |
Genomic location |
chr6-:72125866..72129964 |
Exon number |
3 |
Exons |
72125866..72126262,72127023..72127146,72129769..72129964 |
Genome context |
|
Sequence |
000001 GCAGATCCCG GCAACTTGCG AACCGGGAAA AGTTTGCGGC GCCTCCGCGG GGCGGCGCGA CGCGGCCCGC CCCTCGCGTC 000080
000081 CGCGGTCATC GCGGGTGACT TTCTCGACTC GTCGTCAGCC GGGGCCGCAG CGCGGCCGGT GGGGACTGCG GGGCGGGCCG 000160 000161 GAGTCCGTCC GAGGGCTCCC GCACCTCGGG CTGCGGGAAC ATTAAAATCT CCCCAGATGC TCACTGCTCT GATCATTTCC 000240 000241 CCTACAGCAC CAGACATGTT GGCATCATCT CTTAGTTGGG CCATGTGGCC AGGGAACCCT TCATGAAACC ACCTCTGCAG 000320 000321 TCCTGGAGAG TTGCTGTAGA AGAAGGAAAA GAGAGGAAGA CAACACAACA CAGGAGGGGA TAAGTACCTC TGGACACAAT 000400 000401 GGAAGTAGTA GTTGTTGAGC AGAGGGAAAG GGATAGGAGA AGGATGTGGA CTGCAGTGCT GCAGTGCCAG GTAATAACTT 000480 000481 TGATCATGTA CCTCCTTGGC TCAGGTGCTG TCTCTTCTAC TCTCCTCCTT ACTTGTACTA CCTTATTTAG CACTTAATTA 000560 000561 TATACTTTCT TGACTCACTT TGAGACACAC TGATTATGTG GTCTGCCTCA AAGACAGAAT CCTAGTTTTG GATTTTAGCA 000640 000641 TTACTGATCT ATAGCCTTGC AGGGGCTTAA GGATGGCAGC TGTCTCTCTC CCTTGGGATC TAGCTTTTGC AAATATT |
Predicted Small Protein
Name | ENST00000602878.1_smProtein_398:556 |
Length | 53 |
Molecular weight | 5919.9794 |
Aromaticity | 0.0576923076923 |
Instability index | 46.0153846154 |
Isoelectric point | 7.82379150391 |
Runs | 10 |
Runs residual | 0.041938287701 |
Runs probability | 0.0124183006536 |
Amino acid sequence | MEVVVVEQRERDRRRMWTAVLQCQVITLIMYLLGSGAVSSTLLLTCTTLFST |
Secondary structure | LEEEEEELLLHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHEEEELEEEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToooooooooo |