ENST00000604760.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000604760.1

Source

Gencode19

Same with

,

Classification

intergenic

Length

1533 nt

Genomic location

chr15-:67833410..67834942

Exon number

1

Exons

67833410..67834942

Genome context

Sequence
000001 GCAGCAGCTC CCGGGAGGAT GCGCCCCCGG CGTGGGAAGC CGAGGAACCG GCGCGCGGCG CGCGGCGCGT GGCGCGTGGC 000080
000081 GAGTCGGGGA GAGACTGGTC TTGCTCGCTC AGGAGACCCT CATCGCCCAC AGAGCGCCCG CGGCGACCCG GTCACGGCCC 000160
000161 TTCCATTTCC TGACCCTGCT TAATGACAGC GAGGTGAAAA CATCTACCAA ACGAAGGGTA AAAGGCTGGA GTCCGCCAAA 000240
000241 AGCCAATTTA AGGCTTAACA TTGCAGACCG TTTGTCTTTA CAAAAGCTTC AAAGACGGGG CTGCAGCTCC CGGTTATCCC 000320
000321 CACTTTGTCA AGCCATGAAT CTGAATGTTC GTGGGGTTGT GTGCATCGAA TCAGCAAGAG CAAGGCAAGA ATTCAAGAAA 000400
000401 TAGTTCTTTT TTATCCCCCC TTCCAAGTCA CAGGTTCAGA GGATCATCAT CTTTCTCCCA CATTAGCAAA ACATATTTGC 000480
000481 ATTTTTCAGT GAAGTTCTTT ACCGCACGAG TGCCCTAAAA TAGCAAACAG TTCCCTGTTC AAAAGCAATA GTAAAGAAAT 000560
000561 TCGCCGAAGA GTTTAATTGC CTGGGGACAG CTGCAGTAGT CGCATCATCG TCTCTTATTA AACTGTTGCA GAAATATTCG 000640
000641 GTCTAGTCCA TGTATTTTCA ACTAAATAGC ACTGCTTACG CAGTTGGTGA TATGGTGATA TCACGGAAGT AGCAATAAAC 000720
000721 CTTGGTTATC TTTTTTTTTT TTTTTTTTGA GACGGAGTCT CGCTCCGTCG CCCAGGCTGG AGTGCAACGG CGCGACCTCT 000800
000801 ACTCACCACA ACCTCAGCCT CCCGGATTCA AGCGATTCTC CTGCCTCAGC ACTACCACCC CCACCAGCCC CCAACCCCTG 000880
000881 CCGAGTAACT GGGACTACAG GCGTGCGCCA TCCGTGCCCG CTCATTTTTG TATTTTCAGT AGAGACTGGG TTTCACTATG 000960
000961 TTGGCCAGGC TGGTCTCAAA CTCCTGACCT CGTGATCCGC CCACCTCAGC CTCCCAAAGT GCTGGGGGGA TTACAGGTGT 001040
001041 GAGCCACCGC GCCCGGCCAA CCTTGGTTAT CTTCAAATGC CTTGTTACCT CAGATTTTAA AGTGCATAAG GTTGTAGAAC 001120
001121 GATGGTGCCT CTACAGAAGT TTCTTTACAA ATTGTAATGT GTAGGTTCGT CCTTTATTTC TTTCTTATGA AGGTGCACGA 001200
001201 ATTGGCTTTA CTTTCTGGGG TTGAATTTTG TATAAACTCG GTTGAGGAGG CTTGTCAGTT TCCCTTCTAA CAGTAAGGTG 001280
001281 CTTGATTAAT GTGAGAGAAA AAAATTAATG TTGGTCATTT TCAGTTACAA TACCAAAATT TTTTCTGCAT ACTTTACTCT 001360
001361 GAGTTACTTT TATATTTAAT TTGAAAGGCC ATTGTAGGAG ATAAATTATC ACATTTTAAG TTACTGTAAA TCAATAGCTT 001440
001441 AGGTAGAAAT TCATTTAGTC AGATCCTTCA GATATTCTAG GAATTTCCCC TTTTCACCTG CACTTCACTT CTGTGAAAAA 001520
001521 TAAACCGTTC ATC
[back to top]

Predicted Small Protein

Name ENST00000604760.1_smProtein_344:517
Length 58
Molecular weight 6437.2027
Aromaticity 0.140350877193
Instability index 53.0807017544
Isoelectric point 11.0065307617
Runs 9
Runs residual 0.00394736842105
Runs probability 0.0158393687806
Amino acid sequence MFVGLCASNQQEQGKNSRNSSFLSPLPSHRFRGSSSFSHISKTYLHFSVKFFTARVP
Secondary structure LEEEEELLLHHHLLLLLLLLLLLLLLLLLLEEELLLLEEEEEEEEEEEEEEEEEEEL
PRMN -
PiMo -