ENST00000604760.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000604760.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
1533 nt |
Genomic location |
chr15-:67833410..67834942 |
Exon number |
1 |
Exons |
67833410..67834942 |
Genome context |
|
Sequence |
000001 GCAGCAGCTC CCGGGAGGAT GCGCCCCCGG CGTGGGAAGC CGAGGAACCG GCGCGCGGCG CGCGGCGCGT GGCGCGTGGC 000080
000081 GAGTCGGGGA GAGACTGGTC TTGCTCGCTC AGGAGACCCT CATCGCCCAC AGAGCGCCCG CGGCGACCCG GTCACGGCCC 000160 000161 TTCCATTTCC TGACCCTGCT TAATGACAGC GAGGTGAAAA CATCTACCAA ACGAAGGGTA AAAGGCTGGA GTCCGCCAAA 000240 000241 AGCCAATTTA AGGCTTAACA TTGCAGACCG TTTGTCTTTA CAAAAGCTTC AAAGACGGGG CTGCAGCTCC CGGTTATCCC 000320 000321 CACTTTGTCA AGCCATGAAT CTGAATGTTC GTGGGGTTGT GTGCATCGAA TCAGCAAGAG CAAGGCAAGA ATTCAAGAAA 000400 000401 TAGTTCTTTT TTATCCCCCC TTCCAAGTCA CAGGTTCAGA GGATCATCAT CTTTCTCCCA CATTAGCAAA ACATATTTGC 000480 000481 ATTTTTCAGT GAAGTTCTTT ACCGCACGAG TGCCCTAAAA TAGCAAACAG TTCCCTGTTC AAAAGCAATA GTAAAGAAAT 000560 000561 TCGCCGAAGA GTTTAATTGC CTGGGGACAG CTGCAGTAGT CGCATCATCG TCTCTTATTA AACTGTTGCA GAAATATTCG 000640 000641 GTCTAGTCCA TGTATTTTCA ACTAAATAGC ACTGCTTACG CAGTTGGTGA TATGGTGATA TCACGGAAGT AGCAATAAAC 000720 000721 CTTGGTTATC TTTTTTTTTT TTTTTTTTGA GACGGAGTCT CGCTCCGTCG CCCAGGCTGG AGTGCAACGG CGCGACCTCT 000800 000801 ACTCACCACA ACCTCAGCCT CCCGGATTCA AGCGATTCTC CTGCCTCAGC ACTACCACCC CCACCAGCCC CCAACCCCTG 000880 000881 CCGAGTAACT GGGACTACAG GCGTGCGCCA TCCGTGCCCG CTCATTTTTG TATTTTCAGT AGAGACTGGG TTTCACTATG 000960 000961 TTGGCCAGGC TGGTCTCAAA CTCCTGACCT CGTGATCCGC CCACCTCAGC CTCCCAAAGT GCTGGGGGGA TTACAGGTGT 001040 001041 GAGCCACCGC GCCCGGCCAA CCTTGGTTAT CTTCAAATGC CTTGTTACCT CAGATTTTAA AGTGCATAAG GTTGTAGAAC 001120 001121 GATGGTGCCT CTACAGAAGT TTCTTTACAA ATTGTAATGT GTAGGTTCGT CCTTTATTTC TTTCTTATGA AGGTGCACGA 001200 001201 ATTGGCTTTA CTTTCTGGGG TTGAATTTTG TATAAACTCG GTTGAGGAGG CTTGTCAGTT TCCCTTCTAA CAGTAAGGTG 001280 001281 CTTGATTAAT GTGAGAGAAA AAAATTAATG TTGGTCATTT TCAGTTACAA TACCAAAATT TTTTCTGCAT ACTTTACTCT 001360 001361 GAGTTACTTT TATATTTAAT TTGAAAGGCC ATTGTAGGAG ATAAATTATC ACATTTTAAG TTACTGTAAA TCAATAGCTT 001440 001441 AGGTAGAAAT TCATTTAGTC AGATCCTTCA GATATTCTAG GAATTTCCCC TTTTCACCTG CACTTCACTT CTGTGAAAAA 001520 001521 TAAACCGTTC ATC |
Predicted Small Protein
Name | ENST00000604760.1_smProtein_344:517 |
Length | 58 |
Molecular weight | 6437.2027 |
Aromaticity | 0.140350877193 |
Instability index | 53.0807017544 |
Isoelectric point | 11.0065307617 |
Runs | 9 |
Runs residual | 0.00394736842105 |
Runs probability | 0.0158393687806 |
Amino acid sequence | MFVGLCASNQQEQGKNSRNSSFLSPLPSHRFRGSSSFSHISKTYLHFSVKFFTARVP |
Secondary structure | LEEEEELLLHHHLLLLLLLLLLLLLLLLLLEEELLLLEEEEEEEEEEEEEEEEEEEL |
PRMN | - |
PiMo | - |