ENST00000605249.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000605249.1

Source

Gencode19

Same with

NONHSAT147600

Classification

intergenic

Length

1998 nt

Genomic location

chr7-:130614968..130616965

Exon number

1

Exons

130614968..130616965

Genome context

Sequence
000001 TACACTCATC CCTGCCATTA GCATTCAGGA CCAATCTTCT ATAGCCTATA CGCCACACTG GTCTAGGACA GCACCTAAAT 000080
000081 AATACTCATG CTATAAAAAA TTCATCAAGT TATATATTTT TAAAAACATC CCTAAAATTA TCTTTTTCCT TTACTGAAAA 000160
000161 GAATTTCAGG ATCCCCTCTC TCTCACTGCC TCTCTTCACA CACACCTACC TTAGTTGGTC ACCTATTTTG TAAACATATC 000240
000241 TTCTTTAAAA AAAGAAAGAA ATGGCAGTAC ATGAAAAACT GCTTCGTAAA CAGAAACTAT ATTATTTATA TTTGTAGCAT 000320
000321 TTTTTTCCCC TTGAGGTTAA TTTCCTTTGC TTCCCATAAC TGGAAGCCAA TGATTCAGTG CCATTATATA AGCTTATTTT 000400
000401 CCCTCTTGGA AATAGTAAAT TATAAGAGGT TTGACCCAAA AATATACATC AAAATTAGGC AGTATTCGGT GTTTAGCCTC 000480
000481 CATCTGCCTT GTCTTCTTGT CTTTAGTTGT GCAAGTAGAT GCTGATGATT TCTGGCAGAG CTAAAGTAAG TAAATCATGT 000560
000561 GAATTTATTT TTTTTCCTCA TAAAACAGAT GGCATGGTCT AGCTCTGGGC TTGTATGTTT CATGAAGTAC ATGGGTCTGA 000640
000641 GTGCGTATTT ATTTTGTGAG CCAAGGTTTA TGCCTTCTTC TATAATTTTC TTTCACCGAA AATTACCTGG AGAGCTAGAA 000720
000721 ACTCCATTTG TGTCAGTGTA AGAAGCTTTA GAATCTATAT CCAGACCAAG GCCATGGAAC AATGTAGATT CACTCAGTAA 000800
000801 AAACTCACTA GCGGCCTTCT TTGTACTAGT CTGTCACCTT TGCTTGGCTT TGGGAAGCTT CAAACTAGGG CAGTTTATGT 000880
000881 TTGGGAGTGA CCAGTCAAAT AGCAAGACAG ACATAGGCAA GGATGTAATT TTTAAAAATT TAAGTGGGGA ATGGTGAAGC 000960
000961 ATGAATCAAA ACAGAAGGTA GTCTTACCTT CTTGGAACTG TAAAATAAAT ACATTTGAAA AAGGCACCCT CTCAACCTTC 001040
001041 TGCGAGTCAG AATTTTTGCT GCCACCCCTC ATTTTGAATC TCTATTCTGC ATTTTTTATT CTTTTTTTTA GGAAGGAGGA 001120
001121 AGAAAAATTT CTCCTGAAGA ATTCATTGGA AATTAAAATT AACTTGCGTA TTTTGTATTC TTTGGAATGT GATGAAGACT 001200
001201 GATTTGAAAG GGCAGTGCTG GATTTGGTCA GGCATAGGAA AGGAAGACAT GCAGTCGTCC TGCCTAGCTC ATCCCCGCCA 001280
001281 CGATGGAGAA GTGGGGTTGC TTTCGTTGTA CTTTTTTTCA TTTGTTTCTT GCCAAGCCCA GTGGCTTCTG TTATAACATG 001360
001361 TGGCAGCTTC TCCCTTGGAG ACTGATTCAG TCCAAGTTAC CATAATATTT AGGACCAGCT ACAGAGACGT TTCTTCCCCT 001440
001441 AAACCCATGC CAAATCTAAA TCAAACTATC TTCTTCTCCT TAGCCGTTCA AATAGCTCCA GCTCTTATAT AAAAATACGA 001520
001521 GAAATACACA GGCCTCTTTT CGTTTTATTC CTGTTCAAAC AGATAAACAA ACAAGGCACA TCATGCCTAG GTTGCTTTGA 001600
001601 GCTTGATCAC TTCCTCCTAA AGCAGTCTTA CGCTGTGTTG ATTTTAAGAA TTGCAACTTA GGTGTTCTAG AACATATTCT 001680
001681 GAGAGCATAG TCATAGTCTG TGATCTCAGA ATATGTTTGC TTCCTTCTAG AACATCTGAG TTCTAGAAAT TGCGTACAAT 001760
001761 AAACTGCTGT CAGTGCTGCT GGAGGAAGGA AGAGTAACTC TGACATCACT GGCCTTCAAC AGGTGTGGCG CTGAGCTTCT 001840
001841 GGGCCTCAGA AGCCCTGACT TCTAGAGGCT GGGGGCCAGC GGGGCAGGGA GGTGATCTCA TCATGGATGG CCACAGATCA 001920
001921 TCCACCTGCC AAACAGTTAA CCCTGAACAA GTCATGTCAA TTTATTTTGC TTTTAAAAAA GAAAGTCTGC AAAATAGA
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Predicted Small Protein

Name ENST00000605249.1_smProtein_950:1201
Length 84
Molecular weight 9864.4777
Aromaticity 0.132530120482
Instability index 53.9469879518
Isoelectric point 5.83123779297
Runs 14
Runs residual 0.0286479250335
Runs probability 0.0347553435789
Amino acid sequence MVKHESKQKVVLPSWNCKINTFEKGTLSTFCESEFLLPPLILNLYSAFFILFFRKEEEKF
LLKNSLEIKINLRILYSLECDED
Secondary structure LLLLLLLLEEEELLLLLEELLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHLLHHHHH
HHHLHHHHHHHHHLHHHEELLLL
PRMN -
PiMo -