ENST00000605739.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000605739.1 |
Source |
Gencode19 |
Same with |
NONHSAT075548 |
Classification |
intergenic |
Length |
1068 nt |
Genomic location |
chr2+:174833079..174834146 |
Exon number |
1 |
Exons |
174833079..174834146 |
Genome context |
|
Sequence |
000001 GTCTCGGCTC ACTGCAACCT CCGCCTCCCG GCTTCAAGTG ATTCTCCTGC CTCAGCCTCC CCAGTAGCTG GGATCACGTA 000080
000081 GCGCCCGCCA GCATGCCTGG CTAAGTTTTG TATTTTTAGT AAAGACAGGG TTTCACCATG TTGGCCAGGC TGGTCTTGAA 000160 000161 CTGCCGACCT TGTGATCCGC CCGCCTCTGC CTCCTAAAGT GCTGGGATTA CAGGCATGAG CCCGGCCGAA ATACAATTTA 000240 000241 ATTAAAATAC TTATTTTCTT ATTAGAAAGC TGCCTCTCAA TGGCACCTAC TGCTACATTT ACATAGTAAC CCAAAATTGC 000320 000321 AGTTGCTTAG CAGGGAGAGA ATCACAGTGC TGGATATTAT TTATACTTTT TCTTCCAAAA CGATTTGAGG AAGTACTGTG 000400 000401 CTGGCCATTG TTTACATCAT ATTAGGAGAT CTGGATGTCA CTTTCTTTTC CCATATCCTC GATTTCCTCA CTTTTTAAAA 000480 000481 TGTCATGTGT TTTTGTAAGT TTTCTTAAAT CCTTTGGAAA TGTGATGACG GTGAAAAATC CCTGAAGGCT TCTATACACC 000560 000561 TGTTGGCATG GAATATTTTG CAACCCGTTT CTTCCCTACA AACAGAAGAG ACAACTAAAT ACGGTTTGAT CTACATCTGC 000640 000641 AAGAGCCTAG CCATTCAGTA TTAAAAAGTG ATGGCCCTGG TTGACGGTAC CACACCTGAA GACCTATGCC CTTTCCTTCA 000720 000721 CACTCCCTAC TTCTGCATTT CTTCCCTCCT GAACGTCTAT CAAGTGGACC ATATGAAATT GCCAGTATTC AACTGTTTTT 000800 000801 TATCTTAAAA GGTGACAATT CTATATCATT CAACCTAAAT TAATGTCTCA AGAACATAAC CTTTGTTTCT ATTATTGTGA 000880 000881 CCTTACTTTT AACCATCCTA GAGCTCTTTA ACCTGTTCAC ACTGGATTTC AAGGATCTTA AGTTGTTCTA CTACATAATC 000960 000961 ACTATCACAC TTCAGAAACA TTTTAGTTTA CATTAAATAC ACTTAACCCC CTCATATTTC ATCTCTTCCT TTCTCAAAAA 001040 001041 TAGTAATAAA TAACCTCAAG CCATTAAA |
Predicted Small Protein
Name | ENST00000605739.1_smProtein_434:544 |
Length | 37 |
Molecular weight | 3961.7306 |
Aromaticity | 0.138888888889 |
Instability index | 54.9083333333 |
Isoelectric point | 9.78839111328 |
Runs | 9 |
Runs residual | 0.0695415695416 |
Runs probability | 0.0595693732951 |
Amino acid sequence | MSLSFPISSISSLFKMSCVFVSFLKSFGNVMTVKNP |
Secondary structure | LLEELLLLLHHHHHHEEEEEHHHHHLLLLEEEEELL |
PRMN | LLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
PiMo | ooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiii |