ENST00000605920.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000605920.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
1701 nt |
Genomic location |
chr10+:81585658..81587358 |
Exon number |
1 |
Exons |
81585658..81587358 |
Genome context |
|
Sequence |
000001 CAAGGACCAG GAGCGGGAGC CGAGCCTCGC GGCCCGGGGC ACGGCGCCGC CTGCCCCTCC CCGGCAGTGC CTCCCGACCC 000080
000081 CCTGCCCTCC GCTGGGACAT GGCCTGAGGC CCCGCCCGCC GCCCGGGACC CCTCCCCCAC GCTGCCCCCG GACCCTCGCC 000160 000161 CCAGGACCGC GGGGTCTCTT CCCGGCCCCG CCGCCCGCCC CGGCGAGAAC AGGCCCGGCG GGCAAGGCGG CGGCGGACCG 000240 000241 AGGGAGGCCT GGCCCGGCAG CGGGGAGAAG GGTGCGGCGC AGCCCGAGTT TCCCACCTTT TATCCTGGCC CAGACGCGGC 000320 000321 TGGGGCGGAC GGGACCTCTC GCGCTCTGCC TCCTCCTCTT GCTTCATGGA GCCATGCGCC TGGGTGGGGG CTCCCGAGAG 000400 000401 AAGCTGGCCT GCGGGCGGGC CGGACGCGCT GCGCGGACGG GACGGGGCGA AGGAGGCCGG CAGGCGGAGG AGGAAGCGGC 000480 000481 GGGGCGGCGG CGGCGGCGGC GGCCGGGAAG AACTAGAGGT ATTCCCCGGG CGGCTGGAGG ACTGAGTCGA GCCGGGACCC 000560 000561 GAGTCCTCCG GTATCCCAGC AGCCACCGGA GGCAGTGAGG TAATGGAGGA AGAATGTAGG GAGTCCTCCG GTGGACCACA 000640 000641 CTCCTTCTAG CGAGCCGCGG AAACCATAGA GATCAGGGCT CAGCCGGAGG GCCGGCCCAC TGCTGTCACG TGGCCTCCAT 000720 000721 CCGTGCGCTT TATTGGCTGG TGCTGGCTTT ACGGGGTTGA ATTTTGGACG CTGCCTGCCA TTCGTGGGAC CGAGTTTCAG 000800 000801 GCAGCTGGAA TAAAGAGAGA TATCGGGGGA AAGCCGCGAG AAGGCCAGCG TCCCTCGCTG GGAGCAGAGC TAGCCGAGTA 000880 000881 GGGCGCCCGG CTGTCAAACT GGCCGGCGCA GTGCACGCTG GGCCGCCCCG GAGCGATCGC AGAGCCCGTC GGGAGTCGTA 000960 000961 GTCCCGGACG GGCCCGCGGC ATCGTCCGCG ACGCAGCTCG GGATCCGGGT CGGGGTGTCG GCCGGGTTGC TGCCGGGCAC 001040 001041 CGTCGAGCGT TAGCCACCCA GCATTGAGCT GCCAGCGGCT GTTCTCCCTA AGCACCCTCG CTCACGTCGC CTCGCCTCGC 001120 001121 CTGACCGGCC GCAGCCTTGG ATACCAGCCT TAAATCGAGC CGACTACGGC CCAGCCCCGC CCGCGGCGAG GTGCGCGGGG 001200 001201 TTCGGTGCGA GCCCCTCGCC CCTGGCCGGG CCAGCCTCTT GATGCACCGG GGACGGGCGC GCCCATCCGA CTCTTCGAGG 001280 001281 GGCGGCAGGG CCCCATCTGT GTCTTTCGCT CTCGAGCCCC CAGCTAGAGT TGGCTTCAGC GGAATACCTA CTGTGCGGGA 001360 001361 TTATTCAACA AGCCGATTGA TCACATTCTT CAGCTCTAGC AGTGCAAAGG CTTCACTGAA AAAGAACATT ACAACTTTTT 001440 001441 TGAAAGAAAT TTGGGGGTAA ATTTAATTTT AAATACTGAT TTTTGATAAC ATTTGATCTT ATGACAGCAT TTGTATTTTT 001520 001521 AATTACAGAT AGGATTACAC TAAAAGTCAT TTCTGACCTG CTCCCTTACC CTTATGGCTA AAATAAACTG CTAGGCCCTG 001600 001601 AAGCAAAGGC GAGCCATGTT CTAGAGCAAT GTCTTTCTTG TATTAAAATA CAGCCCCATG CTCACAAAAA AAAAAAAAAA 001680 001681 AAATTTTGGA GTGTAAACAT A |
Predicted Small Protein
Name | ENST00000605920.1_smProtein_1241:1459 |
Length | 73 |
Molecular weight | 7830.8123 |
Aromaticity | 0.0972222222222 |
Instability index | 60.2708333333 |
Isoelectric point | 11.5608520508 |
Runs | 11 |
Runs residual | 0.0118613138686 |
Runs probability | 0.0282796165149 |
Amino acid sequence | MHRGRARPSDSSRGGRAPSVSFALEPPARVGFSGIPTVRDYSTSRLITFFSSSSAKASLK KNITTFLKEIWG |
Secondary structure | LLLLLLLLLLLLLLLLLLLEEEELLLLLEELLLLLLEEEELLLLEEEEEELLLLHHHHHH HHHHHHHHHHHL |
PRMN | - |
PiMo | - |