ENST00000605920.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000605920.1

Source

Gencode19

Same with

,

Classification

intergenic

Length

1701 nt

Genomic location

chr10+:81585658..81587358

Exon number

1

Exons

81585658..81587358

Genome context

Sequence
000001 CAAGGACCAG GAGCGGGAGC CGAGCCTCGC GGCCCGGGGC ACGGCGCCGC CTGCCCCTCC CCGGCAGTGC CTCCCGACCC 000080
000081 CCTGCCCTCC GCTGGGACAT GGCCTGAGGC CCCGCCCGCC GCCCGGGACC CCTCCCCCAC GCTGCCCCCG GACCCTCGCC 000160
000161 CCAGGACCGC GGGGTCTCTT CCCGGCCCCG CCGCCCGCCC CGGCGAGAAC AGGCCCGGCG GGCAAGGCGG CGGCGGACCG 000240
000241 AGGGAGGCCT GGCCCGGCAG CGGGGAGAAG GGTGCGGCGC AGCCCGAGTT TCCCACCTTT TATCCTGGCC CAGACGCGGC 000320
000321 TGGGGCGGAC GGGACCTCTC GCGCTCTGCC TCCTCCTCTT GCTTCATGGA GCCATGCGCC TGGGTGGGGG CTCCCGAGAG 000400
000401 AAGCTGGCCT GCGGGCGGGC CGGACGCGCT GCGCGGACGG GACGGGGCGA AGGAGGCCGG CAGGCGGAGG AGGAAGCGGC 000480
000481 GGGGCGGCGG CGGCGGCGGC GGCCGGGAAG AACTAGAGGT ATTCCCCGGG CGGCTGGAGG ACTGAGTCGA GCCGGGACCC 000560
000561 GAGTCCTCCG GTATCCCAGC AGCCACCGGA GGCAGTGAGG TAATGGAGGA AGAATGTAGG GAGTCCTCCG GTGGACCACA 000640
000641 CTCCTTCTAG CGAGCCGCGG AAACCATAGA GATCAGGGCT CAGCCGGAGG GCCGGCCCAC TGCTGTCACG TGGCCTCCAT 000720
000721 CCGTGCGCTT TATTGGCTGG TGCTGGCTTT ACGGGGTTGA ATTTTGGACG CTGCCTGCCA TTCGTGGGAC CGAGTTTCAG 000800
000801 GCAGCTGGAA TAAAGAGAGA TATCGGGGGA AAGCCGCGAG AAGGCCAGCG TCCCTCGCTG GGAGCAGAGC TAGCCGAGTA 000880
000881 GGGCGCCCGG CTGTCAAACT GGCCGGCGCA GTGCACGCTG GGCCGCCCCG GAGCGATCGC AGAGCCCGTC GGGAGTCGTA 000960
000961 GTCCCGGACG GGCCCGCGGC ATCGTCCGCG ACGCAGCTCG GGATCCGGGT CGGGGTGTCG GCCGGGTTGC TGCCGGGCAC 001040
001041 CGTCGAGCGT TAGCCACCCA GCATTGAGCT GCCAGCGGCT GTTCTCCCTA AGCACCCTCG CTCACGTCGC CTCGCCTCGC 001120
001121 CTGACCGGCC GCAGCCTTGG ATACCAGCCT TAAATCGAGC CGACTACGGC CCAGCCCCGC CCGCGGCGAG GTGCGCGGGG 001200
001201 TTCGGTGCGA GCCCCTCGCC CCTGGCCGGG CCAGCCTCTT GATGCACCGG GGACGGGCGC GCCCATCCGA CTCTTCGAGG 001280
001281 GGCGGCAGGG CCCCATCTGT GTCTTTCGCT CTCGAGCCCC CAGCTAGAGT TGGCTTCAGC GGAATACCTA CTGTGCGGGA 001360
001361 TTATTCAACA AGCCGATTGA TCACATTCTT CAGCTCTAGC AGTGCAAAGG CTTCACTGAA AAAGAACATT ACAACTTTTT 001440
001441 TGAAAGAAAT TTGGGGGTAA ATTTAATTTT AAATACTGAT TTTTGATAAC ATTTGATCTT ATGACAGCAT TTGTATTTTT 001520
001521 AATTACAGAT AGGATTACAC TAAAAGTCAT TTCTGACCTG CTCCCTTACC CTTATGGCTA AAATAAACTG CTAGGCCCTG 001600
001601 AAGCAAAGGC GAGCCATGTT CTAGAGCAAT GTCTTTCTTG TATTAAAATA CAGCCCCATG CTCACAAAAA AAAAAAAAAA 001680
001681 AAATTTTGGA GTGTAAACAT A
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Predicted Small Protein

Name ENST00000605920.1_smProtein_1241:1459
Length 73
Molecular weight 7830.8123
Aromaticity 0.0972222222222
Instability index 60.2708333333
Isoelectric point 11.5608520508
Runs 11
Runs residual 0.0118613138686
Runs probability 0.0282796165149
Amino acid sequence MHRGRARPSDSSRGGRAPSVSFALEPPARVGFSGIPTVRDYSTSRLITFFSSSSAKASLK
KNITTFLKEIWG
Secondary structure LLLLLLLLLLLLLLLLLLLEEEELLLLLEELLLLLLEEEELLLLEEEEEELLLLHHHHHH
HHHHHHHHHHHL
PRMN -
PiMo -