ENST00000605929.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000605929.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
2246 nt |
Genomic location |
chr10+:31476812..31550839 |
Exon number |
2 |
Exons |
31476812..31477128,31548911..31550839 |
Genome context |
|
Sequence |
000001 AAAAATGGGA AAACAAAAAG TGGTCAGGAT GGATTCCAGA GTAGTTGGAG TTATAGGGAA ATCTTCACTG CCAATGTTCT 000080
000081 CTAGATCCTC AGCACTACGC CCTGGCCAGC CCCGAAGTCG TGGAGCCCCC CTCCTGCCCT GGGCTGGCCA CCTCTCTCAC 000160 000161 TGGATGAGTG ATGTGCTCTG GCTCAAAGGC TGAGGGGGCA GGTGGAGGAT GCCTGCCGCG GAACGTGGGT GCTCCCTCCA 000240 000241 TCAGAATCTT CTCACTGGGA GAGGATCTGC GGCCGTCACC TGCAGCCCCG GTCCTGGCAG AGCTTTTGGA GAAAATGGTC 000320 000321 TTCGCTGAAA CATGGGCACT CGTGGGAAGT GCTTTCTGTT CCCCAGGCTC AGGTATGGTG CCTTTCTGAT GTGTCTCCCT 000400 000401 AAAACCACTC ACTCCTACGT AACATTTGTC ATGCAGTTCG GAAATGCCAC TCTTGAGGTC TGTCTTTCCA GCCAGTCAAT 000480 000481 ATGCTCCTCA AAGACAGGGA TTGGGTTATG TTCCGGCACC TGACACAACA ATTTTTTTTT TTTTTTTTTT TTGAGATGGA 000560 000561 GTTTCACTCT TGTTGCCTAG GCTGGAGTGC AATGGCGCGA TCTCGGCTCA CTGCAACCTC CGCCTCCCAG GTTCAAGCGA 000640 000641 TTCTCCTGCT TCAGCCTCCC GAGTAGCTGG GATTAAAGGA ACCCACCACC ATACCCAGCT AATTTTTTTT TTTTTTTTTT 000720 000721 TTTTAGTATT TTTAGTAGAG ATGGGATTTT GCCATGTTGG CCAGGCTAGT CTTGAACTCT TGGACTCAGG TGATCCGCCT 000800 000801 TGGCCTCCCA AAGTGTTGGG ATTACAGGCG TGAACCACCA TGCCTGGCCT GGCACAACAA CTGACACATA GAGGGCACTC 000880 000881 GATCAATAGT ATTGAATAAA TTATGAGTGA AACAGTACAA ATGAATGAAC GTGGACAGGT CCAATAAGGC TGTTGGATCA 000960 000961 TAGGCAGTGT AAAGAGGCAT GGTTATTTAG TTGGTTAAGT CTCAAGCCCA CCGAAGAAGA GTATGTGTTT GTTGCAGGAG 001040 001041 TCAAGGGAGC TTTAGGGAAG ACTGGGTGGC CTTGGTATCC CAGTGGAGTT GCTTTGAGCA AGGTTTAGTC AAAGGTAGGT 001120 001121 TAAGGATATG GCAGGGCAAA AACATCAGGA AGCCAGAGTT TGTCTTTGGA AATTCCAGCC TTTCTTTTCG GGTGATTTCC 001200 001201 CCAACCCCTG CTGCAGCAGT CTCTTATTTA CTTTGACTCA AACACCGAAT TCCCTCCTAC TACTCCTTCT CCTTTCTACA 001280 001281 ACACCAGCTC TCTAGATATT TCTGTTCCTA ATTTTTTTTT TTTTTTGTAG AGACAGGTCT CCCTATGGTG TTGCCCAGGC 001360 001361 TGGTCTTGAA CTCCTAGCCT CAAGTGATCC TCCTGCTTCA GCCTGCCAAA GTGCTGGATT ACAGGTGTAA GCCACCTCTG 001440 001441 GACATCTTAT CTGTGAAATT TTAGGCATTG ATCAGTGCAG AAAGAACCAT GAACTGCAGG ATGTTCTCAG AGACTCTGAC 001520 001521 ATTATGGCCC ACAAGAAGCT GCCCACTCAG CTTCTAGTCA GTTAGGTGTG GACTTCATCA ATCACAGAAT GAAGACTCAG 001600 001601 ACAGCCTCCC AGGAGGACAC AAAGTCAGCC TCAGAGAGGC ATGGAGGTGT TAAAGAGGGA AGTGCCTGCT AGAATTTCAG 001680 001681 TGGGTTGGAT ATGCTCTTTA ACGATGCACA AATCATAGGT ATACATTTTC TGACAATTGG AATCTATTAT TACTCTTGAA 001760 001761 CCAGCTGTTC CCCAGGCTGT TTCCTGTAAT GGAAGGGATA CTTTGAGTTT ATATCTTTTC AATCCTACAT CCTCAGAAAT 001840 001841 CTACACTGAT ACTAATAAAG GGACTCATTT CTCCTATAAG AACCCCTATG CGAGAAAAGT ATGTTTGGGT ATTGCCTAAT 001920 001921 GCACTCATAA TAAATATACA CAGCCATAAA ACAGAGTAAA AGTCCTGGTA AGCCTGTTAT TTGCAGTAAT TGTAGATTGT 002000 002001 GAGTGGACAT TTTAAAGAGA AGCTTACAAG TTAGTTGTAC TTTCTGGTAG TAATTACCTC CCACAACATG ACTCACTTCG 002080 002081 GCAGTTTAAA TGCAAGAGTT GGGTGTCCCA AAATCAACAG TTTTATAAAT AAATCTCTGA ATCATGAACT GAATGCATAA 002160 002161 ATGTTTAAAT ATTTCTCCTT CTTAATCTGA AAGATAGCTT TAGATTTAAG ATATTGCACA TATTTTAAAT ACCTTAGGGG 002240 002241 AAAAAT |
Predicted Small Protein
Name | ENST00000605929.1_smProtein_170:388 |
Length | 73 |
Molecular weight | 7297.415 |
Aromaticity | 0.0694444444444 |
Instability index | 55.525 |
Isoelectric point | 5.10552978516 |
Runs | 7 |
Runs residual | 0.0436942416869 |
Runs probability | 0.0493224316754 |
Amino acid sequence | MCSGSKAEGAGGGCLPRNVGAPSIRIFSLGEDLRPSPAAPVLAELLEKMVFAETWALVGS AFCSPGSGMVPF |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLEEEEELLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHL LEELLLLLLLLL |
PRMN | - |
PiMo | - |