ENST00000606697.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000606697.1

Source

Gencode19

Same with

,

Classification

antisense

Length

1945 nt

Genomic location

chr5-:43577744..43603165

Exon number

3

Exons

43577744..43579302,43583569..43583668,43602880..43603165

Genome context

Sequence
000001 GCTCTCCGAA CCAAAAGGCG ACCTCACGAA ATGCCCCTTT GAGCTCAAAG GCTAGTTACC CCCAGGGGCC CTTCCACTCT 000080
000081 CGGGGACAGG CGAAACCTCT TTGTCTCTGC CTCGGCCTGC GGCCCCCAGC CCAGCCTCCG CGCTTTCCCT CCGCCAGTCC 000160
000161 TTGTCAATCA AACCTGGTGC CAAACGCGGC AGCTGAAGTT TTCAGGGACA CATTTGCTTC TCCCCTTGAA GAACCAGTTA 000240
000241 CAAAGCGTGA TGTCCTCTCT GGGGTCCCAT CAGAACAAAG AAACAGGTCT AAAGACCCTC ATTCCAGAGA GCATCCTGCC 000320
000321 CCATATCCAG AATGAAATCC ATGCTCAGAG ATGCCAAGAA GAATCTAGAC AGACAGGCCT TTCTAGGATC TGTGGGAACA 000400
000401 TCTAAAGACC CTGTAAGAAA CATAGAAAAC CCTCTCCCTC CCCCTCCCCC TCCCCCTCCC CCTCTCCCGA GCCGAAGCTG 000480
000481 GACTGTACTG CTGCCATCTC GGCTCACTGC AACCTCCCTG CCTGATTCTC CTGCCTCAGC CTGCCCAGTG CCTGCAATTG 000560
000561 CAGGCGCGCG ACGCCACGCC TCACTGGTTT TCGTATTTTT TTGGTGGAGA CGGGGTTTCG CTGTGTTGGC CGGGCTGGTC 000640
000641 TCCAGCTCCT AGCCACGAGT GATCCGCCAG CCTCGGCCTC CCGGGGTGCC GGGATTGCAG ACGGAGTCTG GTTCACTCAG 000720
000721 TGCTCAATGG TGCCCAGGCT GGAGTGCAGT GGCGTGATCT CGGCTCGCTA CAACCTCCAC CTCCCAGCCG CCTGCCTTGG 000800
000801 CCTCCCAAAG TGCCGAGATT GCAGCCTCTG CCCGGCCGCC ACCCCGTCTG GGAAGTGAGG AGCGTCTCTG CCTGGCCGCC 000880
000881 CATCGCCTGG GACGTGAGGA GCCCCTCTGC CTGGCTGCCC AGTCTGGAAA GTGAGGAGCA TCTCTGCCCG GCCGCCATCC 000960
000961 CATCTAGGAA GTGACGAGCG CCTCTTCCCG GTCGCCATCC CATCTAGGAA GTGAGGAGCG TCTCTGCCCG GCCGCCCATT 001040
001041 GTCTGAGATG TGGGGAGAGC CTCTGCCCCG CCGCCCCGCC TGGGATGTGA GGAGCGCCTC TACCCGGCCG CGACCCTGTC 001120
001121 TGGGAGGTGA GGAGCGTCTC TGCCCGGCCG CCCCGTCTGA GAAGTGAGGA GACCCTCCGC CTGGCAACCG CCCGTCTGAG 001200
001201 AAGTGAGGAG CCCCTCCGCC CGGCAGTCAC CCCGTCTGGG AAGTGAGGAG CGTCTCCGCC CAGCAGCCAC CCCGTCCGGG 001280
001281 AGGGAGGTGG GGGTCAGCCC CCGCCAGGCC AGCTGCCCCG TCCGGGAGGG AGGTGGGGGG GTCAGCCCCC CGCCCGGCCA 001360
001361 GCCGCCCCGT CCGGGAGGTG AGGGGCGCCT CTGCCCAGCC GCCCCTACTG GGAAGTGAGG AGCCCCTCTG CCCGGCCACC 001440
001441 ACCCCGTCTG GGAGGTGTAC CCAACAGCTC ATTGAGAACG GGCCATGATG ACAATGGCGG TTTTGTGGAA TAGAAAGGGG 001520
001521 GGAAAGGTGA GGAAAAGATT GAGAAATCGG ATGGTTGCTG TGTCTGCGTA GAAAGAGGTA GACATGGGAG ACTTTTCATT 001600
001601 TTGTTCTGTA CTAAGAAAAA TTCTTATCCT GTTGATCTGT GACCTTACCC CCAACCCTGT GCTCTCTGAA TCATGTGCTG 001680
001681 TGTCCACTCA GGGTTAAATG GATTAAGGGC GGTGCAAGAT GTGCTTTGTT AAACAGATGC TTGAAGGCAG CATGCTCGTT 001760
001761 AAGAGTCATC ACCACTCCCT AATCTCAAGT ACCCAGGGAC ACAAACACTG CGGAAGGCCG CAGGGTCCTC TGCCTAGGAA 001840
001841 AACCAGAGAC CTTTGTTCAC TTGTTTATCT GCTGACCTTC CCTCCACTAT TGTCCTATGA CCCTGCCAAA TCCCCCTCTG 001920
001921 CGAGAAACAC CCAAGAATAA TCAAT
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Predicted Small Protein

Name ENST00000606697.1_smProtein_1718:1939
Length 74
Molecular weight 8188.4543
Aromaticity 0.0547945205479
Instability index 46.6506849315
Isoelectric point 9.50726318359
Runs 11
Runs residual 0.00653999116217
Runs probability 0.0206596971303
Amino acid sequence MCFVKQMLEGSMLVKSHHHSLISSTQGHKHCGRPQGPLPRKTRDLCSLVYLLTFPPLLSY
DPAKSPSARNTQE
Secondary structure LEEHHHHHHLLLEEELLLLLEEELLLLLLLLLLLLLLLLLLLLLHHHEEEEEELLLLLLL
LLLLLLLLLLLLL
PRMN -
PiMo -