ENST00000606697.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000606697.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
antisense |
Length |
1945 nt |
Genomic location |
chr5-:43577744..43603165 |
Exon number |
3 |
Exons |
43577744..43579302,43583569..43583668,43602880..43603165 |
Genome context |
|
Sequence |
000001 GCTCTCCGAA CCAAAAGGCG ACCTCACGAA ATGCCCCTTT GAGCTCAAAG GCTAGTTACC CCCAGGGGCC CTTCCACTCT 000080
000081 CGGGGACAGG CGAAACCTCT TTGTCTCTGC CTCGGCCTGC GGCCCCCAGC CCAGCCTCCG CGCTTTCCCT CCGCCAGTCC 000160 000161 TTGTCAATCA AACCTGGTGC CAAACGCGGC AGCTGAAGTT TTCAGGGACA CATTTGCTTC TCCCCTTGAA GAACCAGTTA 000240 000241 CAAAGCGTGA TGTCCTCTCT GGGGTCCCAT CAGAACAAAG AAACAGGTCT AAAGACCCTC ATTCCAGAGA GCATCCTGCC 000320 000321 CCATATCCAG AATGAAATCC ATGCTCAGAG ATGCCAAGAA GAATCTAGAC AGACAGGCCT TTCTAGGATC TGTGGGAACA 000400 000401 TCTAAAGACC CTGTAAGAAA CATAGAAAAC CCTCTCCCTC CCCCTCCCCC TCCCCCTCCC CCTCTCCCGA GCCGAAGCTG 000480 000481 GACTGTACTG CTGCCATCTC GGCTCACTGC AACCTCCCTG CCTGATTCTC CTGCCTCAGC CTGCCCAGTG CCTGCAATTG 000560 000561 CAGGCGCGCG ACGCCACGCC TCACTGGTTT TCGTATTTTT TTGGTGGAGA CGGGGTTTCG CTGTGTTGGC CGGGCTGGTC 000640 000641 TCCAGCTCCT AGCCACGAGT GATCCGCCAG CCTCGGCCTC CCGGGGTGCC GGGATTGCAG ACGGAGTCTG GTTCACTCAG 000720 000721 TGCTCAATGG TGCCCAGGCT GGAGTGCAGT GGCGTGATCT CGGCTCGCTA CAACCTCCAC CTCCCAGCCG CCTGCCTTGG 000800 000801 CCTCCCAAAG TGCCGAGATT GCAGCCTCTG CCCGGCCGCC ACCCCGTCTG GGAAGTGAGG AGCGTCTCTG CCTGGCCGCC 000880 000881 CATCGCCTGG GACGTGAGGA GCCCCTCTGC CTGGCTGCCC AGTCTGGAAA GTGAGGAGCA TCTCTGCCCG GCCGCCATCC 000960 000961 CATCTAGGAA GTGACGAGCG CCTCTTCCCG GTCGCCATCC CATCTAGGAA GTGAGGAGCG TCTCTGCCCG GCCGCCCATT 001040 001041 GTCTGAGATG TGGGGAGAGC CTCTGCCCCG CCGCCCCGCC TGGGATGTGA GGAGCGCCTC TACCCGGCCG CGACCCTGTC 001120 001121 TGGGAGGTGA GGAGCGTCTC TGCCCGGCCG CCCCGTCTGA GAAGTGAGGA GACCCTCCGC CTGGCAACCG CCCGTCTGAG 001200 001201 AAGTGAGGAG CCCCTCCGCC CGGCAGTCAC CCCGTCTGGG AAGTGAGGAG CGTCTCCGCC CAGCAGCCAC CCCGTCCGGG 001280 001281 AGGGAGGTGG GGGTCAGCCC CCGCCAGGCC AGCTGCCCCG TCCGGGAGGG AGGTGGGGGG GTCAGCCCCC CGCCCGGCCA 001360 001361 GCCGCCCCGT CCGGGAGGTG AGGGGCGCCT CTGCCCAGCC GCCCCTACTG GGAAGTGAGG AGCCCCTCTG CCCGGCCACC 001440 001441 ACCCCGTCTG GGAGGTGTAC CCAACAGCTC ATTGAGAACG GGCCATGATG ACAATGGCGG TTTTGTGGAA TAGAAAGGGG 001520 001521 GGAAAGGTGA GGAAAAGATT GAGAAATCGG ATGGTTGCTG TGTCTGCGTA GAAAGAGGTA GACATGGGAG ACTTTTCATT 001600 001601 TTGTTCTGTA CTAAGAAAAA TTCTTATCCT GTTGATCTGT GACCTTACCC CCAACCCTGT GCTCTCTGAA TCATGTGCTG 001680 001681 TGTCCACTCA GGGTTAAATG GATTAAGGGC GGTGCAAGAT GTGCTTTGTT AAACAGATGC TTGAAGGCAG CATGCTCGTT 001760 001761 AAGAGTCATC ACCACTCCCT AATCTCAAGT ACCCAGGGAC ACAAACACTG CGGAAGGCCG CAGGGTCCTC TGCCTAGGAA 001840 001841 AACCAGAGAC CTTTGTTCAC TTGTTTATCT GCTGACCTTC CCTCCACTAT TGTCCTATGA CCCTGCCAAA TCCCCCTCTG 001920 001921 CGAGAAACAC CCAAGAATAA TCAAT |
Predicted Small Protein
Name | ENST00000606697.1_smProtein_1718:1939 |
Length | 74 |
Molecular weight | 8188.4543 |
Aromaticity | 0.0547945205479 |
Instability index | 46.6506849315 |
Isoelectric point | 9.50726318359 |
Runs | 11 |
Runs residual | 0.00653999116217 |
Runs probability | 0.0206596971303 |
Amino acid sequence | MCFVKQMLEGSMLVKSHHHSLISSTQGHKHCGRPQGPLPRKTRDLCSLVYLLTFPPLLSY DPAKSPSARNTQE |
Secondary structure | LEEHHHHHHLLLEEELLLLLEEELLLLLLLLLLLLLLLLLLLLLHHHEEEEEELLLLLLL LLLLLLLLLLLLL |
PRMN | - |
PiMo | - |