ENST00000607862.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000607862.1

Source

Gencode19

Same with

,

Classification

antisense

Length

6001 nt

Genomic location

chr13+:78493824..79158297

Exon number

3

Exons

78493824..78494053,78848388..78848472,79152612..79158297

Genome context

Sequence
000001 GATGCCTGGA CAGCATCAGT AGTAGTTGCC CGAGGGAGGG GGGCAGTCCT CGTCCGGGGA CAGGTCCCAA AAGGCTGTTT 000080
000081 ATTTGTTAGA GTTCTACGCT CTTCAAATGA ACCCAAATCA AGGGCAAGTT ATCACGCACC ATGTGACACC CGGCAGCTCC 000160
000161 AGACTAGAAC AAGGCTCTGC ACTGAACGTG ATAATTGAAC TTTTAATGCC AAGTGTCACT TTTCTTTCAG ATGCCAATAT 000240
000241 TTTACCTCTT GGGTACTTTC TGTGTAGAAG ATTCATAACA AGAACAATAC TTATTCTGCA ATTCTTTATA TAAAGTAAGA 000320
000321 AGAAAGCCCA AAGACAAAAC CAGAGGCAAC TGGCTGCTGC ATCGCCCACC TAGTGGCAGT AGTGTGAGCT ATGGACAAAA 000400
000401 GATCTAAGTC TCCAGGACAA AGAGTTGTGC AGCTGCTCAT TTTCCTGTTG ACTTCTGTCT AAGACTTGGA GATGTTTGTA 000480
000481 AGATTGGGAC CTACCTACAG AGGTATCACA CTCCTCTTGG TCTAACTCAC TCTTGAACTG ACATTCGTGG TGAATTTCTT 000560
000561 TTGTCACTTA GCATATTAGA AGAGATGTTT TACTATAATT CTCACAATCA ATCCATAAGC AAGTGGTTAA AGGCCTTTTT 000640
000641 GTACTTAGTT ATCTCAGCAC TGTCAGGGAT GGCTAAAGAG AATAAGCATG GCCTCTGCTT TCCATTTTTT AACATATGAC 000720
000721 AACTAAAATA CAAAAAAACA CAAGTTATGA CAAACATATA ATGCTTCCTC TAGACAAGCA TTGCAGCTTG GCATTGCACT 000800
000801 AAGTGTTTTG ATACTAATCC ATTAAATTCT CCCACCACCC AACAACGTAG AATATATCAG AGAGTGAAGC ATGGAGAATT 000880
000881 TATATAATTT GCTCAAGGCT ACAAAGCTAA TAAATGTGGA GCCAGGATTC AAATGTAGGC ATTCTGATTC CCTAGTCTAT 000960
000961 GCTCTTACCC AGCATGTTAT GCTGATGCTC AAAACAGTTG AGTGTTATAT TAATTTAAAT AAAAAAGATA AATTAGAGCT 001040
001041 AGAGAGTGTG TAATAGGCTC CATGGAGAAA GTCAAATGGA CTTGGAACTT GGCAACTGAA GAGACCATGG CCAGACAAAT 001120
001121 GGCAAGAAAT TCTGGCAAGA AGAACAATAG GCATGGAGTG TCCGCAGCAG AGGAAAGAAG CCAATCTCAC TACAGTGGAC 001200
001201 GGAAACAAGG AGAAATTAAA TGAGATCATT AGAATGGAAA AGATTGTAGA AATCCAGATA ATTTATAGTG AAAATTGAAT 001280
001281 TTCTAAGAGG GTGAAGTTAA AATTGGGTTA ATAGACACTA TCTCAAAAAT GTAATCTGTT ACATTACAAC AGAAACAAAG 001360
001361 CTTCTCATGA CATGCAGAGA TCCATAAATG ACTGTTTTAC TTTTGGCAAA ATTGAAAAGA GAATAATAGT GACTGCAGGG 001440
001441 TCAAGATTAA TGCATGCTGA TTTTTAGGTA ACATGGGAGA ATTAAAGAGC CAGAGTTTCA CTACTGGCCA CCAACAGTCC 001520
001521 ATTTTAATGT GTACTCAGTC TTTGTGACCT CTGTCCATTA GAGATATATC AAACTTGTAT TTAAACTGAA ATGTGATTAG 001600
001601 AGCCATGAGG CCTGCCTGGA GGTAAAGCAG GTTGAGAAAA ATTTCCTCAA TGACACATTC TCTATGGAAA GTCTTTCTCA 001680
001681 AAGGAAAAGA AATTGTGTCC TACTGGCAAA AAGCAGAAAA GGAAGTGGGG AGGGGAAATG GAAAAACATC TAAACCATCT 001760
001761 CTGGGGAAAA GGTGATACTA AATATAAACT GGCCATCAAC ATAGTGAAGC TGAAGAAGGC AAGGGGTGTC TAAATGTATC 001840
001841 ATCAGAAAAG TTAAGAAACA GGGCAAAGTA GGCTAGCTTA GGAACATCAA CAGAATATTG GAAGAAGAAC AGGGGGCAAT 001920
001921 TTTATAACCT CTCAATCATT TCCAACTTCT TACAGTGCTC CAGAAAAGAA AAAGTGTCCT TGATAAGAAT GATTTATTGA 002000
002001 ACAATTATCT CTTTCCGCCC TCAGCTCTCT GGAACTGGAC AACAGACAGA TCTGGTGAAT TATAATTATG GAGTTCTCCA 002080
002081 GAAGAACTTC CTCTCAAGGA TGCACAATTT TCCAGTTAGT CACAAGGCAG CATCACAAGC AAAATGGGGC TCTCTCTTTA 002160
002161 TTTAACAAGG CCTATCTTCT ACACACAGTT TCTGCAATTT CCGCTTCTCC TTATGTGTAT CTTTCTCTGC CCTTTTGTAT 002240
002241 GTTCCACTTA TGTAGGATTG TTTGCCCCAC AGTCACACAC AATACAATCA TCATGCTAAC CCCCTCCCCA AAAACTCCCT 002320
002321 ACTCCCTTTT CATCTCTCCC ATTGCTCCTC CACACTGGTC CTGCGCTGGC CTGTTTGCTC CCTGAGTAAA TTAGATCCCT 002400
002401 GCATGTGCTG CTCATCTTCC CTCCCTCCAC CTTCCACCAT ACTCTCTTCA TGTCCACATC TGCCTCTTGG CAAATGCCCT 002480
002481 GTGGAAGAGA GATTTTTCCC AGGCTCTCCT CCCTTGTAGG TCTCTTTGTG CCTCCGCATC CTGAGTTTCC TCTGACTCTT 002560
002561 GTTTCTTTCT GCTTCTTGTG ACAGCTATGG TTACAGCTAA CAAGCATGGG AGGAAGGATC TGAGGGAAAG TTGTGCTTTT 002640
002641 GGTTCACTAA ATCCTTAGAT TTGATTTGGG TAGTCAGAAA GTGCTAAAAA GTTTGTTTCA ATGGAACATC CTGCAGTCCC 002720
002721 AAATGGGGTA AACTTATCTT GTTTTTCATC TGCTGTCATG GTTAACTGGC AACTTCCAGG TACAAGGTGA CTGTCTGGCA 002800
002801 TCTCAGGTGC ACACATGAAG GCAATTTCAG AAAGAATGCC TATGGATTAC AGACCATTCA GCTGAGTTTT ATCTGGGGCT 002880
002881 TTCTGGCACG GAATATGTAC CAGCATCTTA GATCAATTCT GGCACATTAT TTTAAAAGTT TTTTGTTCCT GAGTTCCTTG 002960
002961 GTACCTGATC ATTCCAATAT TTTCTGCCTT ACAAAGTCAC AGGAAAACAG GTTTGGAGCT GAGTATTTTC AATCACCACT 003040
003041 GACTTGGTGA CAGACACTAA ACTCATTTCA CTTAGGATTA TAGGTTGAAC TCAAATTGGG ATCCCTGAAG AGAAAGACCA 003120
003121 GTCCTTTATC CAGTACCTTA AGGAAAACAT TTCTTATTTC CATTAACAAC CAGAAAAGGA AAGACAGTGC AACAGCTGGA 003200
003201 AGAGCACTGC AAATATCAGG GTTACAAAGA GTAACCCAGA AACCTTTAAA ATAATTTAAA GTGGTGATAA AACCAGTAAC 003280
003281 ACACTGCACT TCTATTAATG CAGTAATCCT TAACCCTTGA ACCTAACTTG TACTTACACT AAGAAGTCAG AAGAACTGTT 003360
003361 TTTACTTGAT CTACCAAGGC AATTTCCCAT AGTTTGATTG GAAATAGTGC TGATGATTTT CTCATTTAAG TTATCTACAA 003440
003441 AGCACTAAAA AAAAGTGACT CTGCTGGAAT TATCCTTCTA AGAAAATAAG AAAAAAATAG AAATTTCTTA CAACTAAGAA 003520
003521 ATGGATCAAG ATAACATTGG TCTGTGAGAT TTAAATCTAT CAAAATATGT GAGCATACCA CAGATATGAT TTCTTCAGTT 003600
003601 CTCTGCAAGG TAACCAAAGC AATTCCAAGA AGTCTTATTT TATTAGAACT CAAATTTATT AAGTATGACC TATCTAAGAT 003680
003681 CATAGTGGGC AGACAACTAC CTTGGACGTG GGGTTAAGAG AAGATAAAAT TCAAAAGTTT GAAAGTAAGT AAAGGATAAG 003760
003761 CAAGATTCTT TGAATGATCA ACAGCACTCC ACAGGCACAC AGAGACACAA AAACAGCTAA AAAGGCAAGG ACAAAATTAA 003840
003841 ACAGTAATGA TGATTTATAG TAAGATACTC TGAGACATGA TAGAAGTCTC AGTACACCAA AAGGAAAATC TTGTTTGCTC 003920
003921 AAATTATTTG TTTCTTCTGT CTAATGAATG TAATTCTAAT ATACAAGTGA TAACACTGGC ATTTCTTTGA AATGTTGATT 004000
004001 CAGTTTAATT ATGAAAATCA CCAAGGTATT TTCTAGCTGC TGCATCACTC CCTGTACTAA GATTAATCAC ATCAACATCA 004080
004081 TTCATTTAAT CTTCAAAGAG GAAGCAGTTG TCCACAAAAG CCTTCAAATA GCTTCATTAG TGCAATTTTT CAGTCTCAAA 004160
004161 CACTTAGCTA GCAGCATATG ATTGAGAGTA AGGTCATTAT ATTCATCTAT TTCCTAATCT AATTTTTGTA ATGTTTCTAC 004240
004241 ATTTAATGTA GGAATGTGTA AGTGTGGAGT TTTTGCCTTC TCTTTGTTTG TAAAACAGCT CAAAACATGA AGAAAATAAT 004320
004321 GATTCTAATT ATAAAATATT TGATTGCTAT GGTTTTAAGT CATGAAATTT AATGTACAGG CCCATGGCCA GTTCATTTTT 004400
004401 TCTTTTTTCT TTTTTTAATG TGAAAAGAAT TTAGTGTAGA AATGCTCTAT TTTCTTGTCT CTTGTAGACA AAGAAAAACT 004480
004481 TAGCGCATGA GAGACGTGTC TGACTTCAGA AACTGGAATT ACAAAAGTCA CTGCAAATAA AATTTCTTTG GTGTTTTAAA 004560
004561 ATGCAAGATG AATTCTATAT TTAAAAACAG AAGCCTCACT TATGTTTCTC TAATAAGACC CATTCTTAAC ATCCTTTTCT 004640
004641 TTGATGAAAG CATTAATATT CCCTTTCCTT ATTGGAAACC AACAGGTATC AGAGTCCCAC AAAATAACAC TGTATTGTTG 004720
004721 ATGCACCGAT CAAATCATTC TTTTAATCAT TAAAAATTAT GCAGTTGCAA TCAAAAACAT TCTCAGAGAG ACTTAGAGCA 004800
004801 GAGCCTGGCA CCAGCAGGGT GTGGTGATAT AGTCATTTGT AATTACTGTA CCTACTCTGA AGGGTTATAA AATGTGTCAG 004880
004881 AAAGTAAAAT TTGCTGAGCC CCATTACCAA GAAGCAAAAC TTACTAACTG GTGCTTTAAA CTTTGCATCT TATAAAGGAA 004960
004961 TGATTTATTT GACTTTTGAC TGGTCCACTT GCAGAAATCA TTACATTGCA ATATTCAGTG ACTGTGCAAA GGGGAAAAAA 005040
005041 AGGATAAATC ATACAGAGAC ATTCTCAAGT TAACATCTGG CGAGCATATA AGGCCAAATC TGTAAGGCAA GATCTGCCTA 005120
005121 CGATGGCATA AATAATGGTG TGTATTTGCA GTTTAGGCCA AGGGATAAGG GCTTTTGATC ATAAAAATAG TTCATAACCA 005200
005201 ATTGCAATGA GATGATGCAA TTGTAAAAAT TTTGTTTCCA CAAACTGTAT AAAGACAATT ATGATATTTT AAATATTAAC 005280
005281 CCCTTTTAAA TTGTTTTCAA ATAAAATTAT AACGGCTTTT TGTAAAACCA AATTCTAATT GACCCAATCA AATTTTAAGA 005360
005361 TAAATTATGA AGGTGAGAAT AACACCAGCT TGAAAATATC AGTTTGCCAT TTGTCCAGCT ACATGCAAAG TCACCAGAAT 005440
005441 AAAATGGAAT TATATGAAAG AGGAGCAATA AACTGCATTA TTTACATGTG TTCAATATTA TAATCAGAGG TAAAAAGTGT 005520
005521 GTTTTTAAAT ATTTGTACAC ACAAAGTTTT ATTATCTACT TTACATAATA CTGTGTTAGA CACACTGGGA AATGCAAAGA 005600
005601 TAGAAAAGAT AAACTATCTT CTCCTGAGAA GCCTTTACTA TGGTAGAAAA GATAGGAGCA CATGTCATTA CAATAAGAGG 005680
005681 AAATGTGAGA TAAGTGACCA AAGAGGATTT TTGTCTTAAA AAATCCTAAG TTTTTATCTA AGAGTTTACA AGTAGATTCT 005760
005761 TCTGAGCCAG AACACCATGG AAGGTTTCCT GGCATGATGA CATATGAGAT TCAAGGAATG GGTATTATGT TCAAAGCTCA 005840
005841 AGACTGGGGA GAGAAGATTA CATTTTACAG TTTAAAATAT TTTATTTACC TTTCCCAACA CTTATGCATT TGTATCTTCT 005920
005921 GCAGCGAATG ATAAAATTTC TTTTGTTTTC AGAAGTGTCA AGATAATTTT TTATTAAAAT AAACAAATAA ATTCGAGAAG 006000
006001 A
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Predicted Small Protein

Name ENST00000607862.1_smProtein_4010:4180
Length 57
Molecular weight 6311.5499
Aromaticity 0.0714285714286
Instability index 50.6696428571
Isoelectric point 9.30303955078
Runs 7
Runs residual 0.0282982045277
Runs probability 0.0170969288616
Amino acid sequence MKITKVFSSCCITPCTKINHINIIHLIFKEEAVVHKSLQIASLVQFFSLKHLASSI
Secondary structure LEEEEEELLLEELLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLL
PRMN LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTTooooooooooooo