ENST00000608034.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000608034.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
670 nt |
Genomic location |
chr20+:18548091..18549799 |
Exon number |
2 |
Exons |
18548091..18548240,18549280..18549799 |
Genome context |
|
Sequence |
000001 CTGCGAGAAT CGAGGCACTC GCTGGCGTAC CCATGTATCG AAATGAGTTC ACGGCCTGGT ACCGGCGGAT GTCGGTGGTC 000080
000081 TACGGGATCG GCACCTGGTC TGTGTTGGGC TCACTGCTTT ACTATAGCCG GACAATGGCG AAGTCGTCAG GTCTCACCCT 000160 000161 GTCGCCCAGG CTTGAGTGCA GTGGCATGAT CTCGGCTCAC CACAACCTGC GTCTCCGGGC TCAAGTGATT CTCCTGCCTC 000240 000241 AGCCTCCCGA GTAGCTGGGA TTGCAGGCGC AGGCCACTGC TGCCCGGCGA ATTGTTTTAT TTTTTTTTTG AGACAGAGTC 000320 000321 TAGCTCTGTC GCCCAGGCTG GAGTGCACTG GCGCTATCTT GGCTCACTGT AACCTCCATC TCCCAACTCA AGCAGTCCTC 000400 000401 CTGCCTCATC CTCCCCAGTA GCTGGGGTTA TAGGCCCATG CCACCACGCC CAGCTAATTT TTGTATTTTT AGTAGAGATG 000480 000481 GGGTTTCACT ACGTTGGCGA GGCTGGTCTC AAACACCTGA CCTCAGGTGG TCCACCTGCC TCGGCCCCCA CAAAGTGAGA 000560 000561 TTGGGATTAC AGGCGTGAGC CACCGCACCC AGCTTTTCTT TTCCCTTCCT TTTCATTCCT TCCTTCATTA TTGGGGTTGG 000640 000641 AGAGAGTGGA TGTAATTCTT ACCTTAGTTA |
Predicted Small Protein
Name | ENST00000608034.1_smProtein_32:253 |
Length | 74 |
Molecular weight | 8362.6712 |
Aromaticity | 0.109589041096 |
Instability index | 59.0095890411 |
Isoelectric point | 10.0060424805 |
Runs | 14 |
Runs residual | 0.0476358815731 |
Runs probability | 0.0443889267419 |
Amino acid sequence | MYRNEFTAWYRRMSVVYGIGTWSVLGSLLYYSRTMAKSSGLTLSPRLECSGMISAHHNLR LRAQVILLPQPPE |
Secondary structure | LLLLHHHHHHHHLEEEEEELHHHHHHHHHHHHHHHHHLLLLLLLLLEEELLEEHHHHLLL LLEEEEELLLLLL |
PRMN | - |
PiMo | - |