ENST00000608306.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000608306.1

Source

Gencode19

Same with

,

Classification

intergenic

Length

873 nt

Genomic location

chr3-:107574011..107596918

Exon number

7

Exons

107574011..107574076,107575927..107576049,107577978..107578108,107586158..107586424,107591815..107591873,107594977..107595033,107596749..107596918

Genome context

Sequence
000001 AACAGCAGCG TAGCTGAACA TCTTACGGAT GGCCCAGGGC TCCAAAGGCT CGTTTCCTAA GTGAGAGAGA GCCTGGCTGA 000080
000081 AGCTGTATTA CCATTCATTC TCCAGCCTCC GAAGTCTCAA AGCATCACTT CCACCATACT CTAACTGTCA AGACAAACAC 000160
000161 AAAGGCCCAG AAACTGCCAG ACTGTCTTCT GAAGTGGCTA TAATATTTAC ACTCCCATCA GCAGTGTAGA AGGGGTCTCA 000240
000241 CTATGTTGTC TGGAGTGCTG TGGTGGAGTG GAGTGGCTAT TCACAGGATT CTTGGAATGG ACTGTAAAAG TCTGGAATCA 000320
000321 AGACTTTGTG TTTCCTCTCT AACATGTAAA GAGCTTAGAA GTTGTCGCTA TTGCCCTTAC AACAAAATGA AGCTGGACAA 000400
000401 ACTGAAAATC AATGACTTTT CTTGGACTCA CTATACAGCT GAGTTTGCAG AGTAAACCAC TACCCTGAAA TCTGGAAAGG 000480
000481 CAGGTGCACC CACAGATCCT CAGCTGAGAT CCAATTACCT GAAATAGAAG CTGCCATTAG GAACACTTAA AAGTGGTTCA 000560
000561 ATATGAAGGC AGTAGGAGGG ACCAGATGAA CTCGCATGAT TACACATTCA CATCCGATAT TCCACCATTC AGCTCTTCTT 000640
000641 CCAGCTCTTT TCCCAGTGGG AGAGCACTAA GACTACTGGT TTGTAGCCTG TTCTGCTGGG ACACAGAATC ACTTGCTCCA 000720
000721 TCTCATACAT TGATGATGAT TAATTTGTAT GTGTACCTTC CAAAAAAGAT GGTTGTGTTT GAATGGAGGC CTTCTGGACA 000800
000801 GGAAAATATG GAGAGTGCGT GCTTTGGATT CAAGACTGGG AATGAGGGGA CCAGAAACCT ATTCTGTGGC TGT
[back to top]

Predicted Small Protein

Name ENST00000608306.1_smProtein_242:454
Length 71
Molecular weight 8164.5104
Aromaticity 0.114285714286
Instability index 44.1071428571
Isoelectric point 8.67803955078
Runs 12
Runs residual 0.0265912305516
Runs probability 0.0476505917682
Amino acid sequence MLSGVLWWSGVAIHRILGMDCKSLESRLCVSSLTCKELRSCRYCPYNKMKLDKLKINDFS
WTHYTAEFAE
Secondary structure LLLLEEEEHHHHHHHHHLLLLLLLLLLEEEELLLHHHHHHLLLLLLLLLLLLHHHLLLLL
LLLLHHHHLL
PRMN -
PiMo -