ENST00000608306.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000608306.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
873 nt |
Genomic location |
chr3-:107574011..107596918 |
Exon number |
7 |
Exons |
107574011..107574076,107575927..107576049,107577978..107578108,107586158..107586424,107591815..107591873,107594977..107595033,107596749..107596918 |
Genome context |
|
Sequence |
000001 AACAGCAGCG TAGCTGAACA TCTTACGGAT GGCCCAGGGC TCCAAAGGCT CGTTTCCTAA GTGAGAGAGA GCCTGGCTGA 000080
000081 AGCTGTATTA CCATTCATTC TCCAGCCTCC GAAGTCTCAA AGCATCACTT CCACCATACT CTAACTGTCA AGACAAACAC 000160 000161 AAAGGCCCAG AAACTGCCAG ACTGTCTTCT GAAGTGGCTA TAATATTTAC ACTCCCATCA GCAGTGTAGA AGGGGTCTCA 000240 000241 CTATGTTGTC TGGAGTGCTG TGGTGGAGTG GAGTGGCTAT TCACAGGATT CTTGGAATGG ACTGTAAAAG TCTGGAATCA 000320 000321 AGACTTTGTG TTTCCTCTCT AACATGTAAA GAGCTTAGAA GTTGTCGCTA TTGCCCTTAC AACAAAATGA AGCTGGACAA 000400 000401 ACTGAAAATC AATGACTTTT CTTGGACTCA CTATACAGCT GAGTTTGCAG AGTAAACCAC TACCCTGAAA TCTGGAAAGG 000480 000481 CAGGTGCACC CACAGATCCT CAGCTGAGAT CCAATTACCT GAAATAGAAG CTGCCATTAG GAACACTTAA AAGTGGTTCA 000560 000561 ATATGAAGGC AGTAGGAGGG ACCAGATGAA CTCGCATGAT TACACATTCA CATCCGATAT TCCACCATTC AGCTCTTCTT 000640 000641 CCAGCTCTTT TCCCAGTGGG AGAGCACTAA GACTACTGGT TTGTAGCCTG TTCTGCTGGG ACACAGAATC ACTTGCTCCA 000720 000721 TCTCATACAT TGATGATGAT TAATTTGTAT GTGTACCTTC CAAAAAAGAT GGTTGTGTTT GAATGGAGGC CTTCTGGACA 000800 000801 GGAAAATATG GAGAGTGCGT GCTTTGGATT CAAGACTGGG AATGAGGGGA CCAGAAACCT ATTCTGTGGC TGT |
Predicted Small Protein
Name | ENST00000608306.1_smProtein_242:454 |
Length | 71 |
Molecular weight | 8164.5104 |
Aromaticity | 0.114285714286 |
Instability index | 44.1071428571 |
Isoelectric point | 8.67803955078 |
Runs | 12 |
Runs residual | 0.0265912305516 |
Runs probability | 0.0476505917682 |
Amino acid sequence | MLSGVLWWSGVAIHRILGMDCKSLESRLCVSSLTCKELRSCRYCPYNKMKLDKLKINDFS WTHYTAEFAE |
Secondary structure | LLLLEEEEHHHHHHHHHLLLLLLLLLLEEEELLLHHHHHHLLLLLLLLLLLLHHHLLLLL LLLLHHHHLL |
PRMN | - |
PiMo | - |