ENST00000608591.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000608591.1

Source

Gencode19

Same with

,

Classification

antisense

Length

1979 nt

Genomic location

chr21+:27543189..27589700

Exon number

3

Exons

27543189..27543370,27587064..27587180,27588021..27589700

Genome context

Sequence
000001 AACTGCGCCC GCTCGCGCCG GGAGGGGCCC TCGCGCCCCG CGCCCACAGG TGCACGCGCC CTTGGCGCCG CCTGCACCCC 000080
000081 ACGCGCCCCC TCCGCTCCCC GGCCGACGGC CCACCTGGGC TTCGTGAACA GTGGGAGGGA GAGTCTGGGG CCAGGAGAGG 000160
000161 GACGGTGCAG GATCAGGGAA AGGCTCTCCC TCTGTCACCC AGGCTGGAAT GCAGTGGCAT GATCTTGGCT CACTGCAGAC 000240
000241 TTCGCCTCCG AATTCATGTG ATTCTCCCAC CTCAGCCTCC TGAGTAGCTG GGATTACAGA TACAGGGTCT CACTCTGTTG 000320
000321 CCCAGGCTGG AGAACAGTGG CACGATCATG CGTTATTCAC TGCAGACTTG AACTCCTGGC CTCAAGCAAT CTTTCTACCT 000400
000401 TGACCTCCCA AAGTGCTGGG ATTACAGGTG TGAGCCACTG TGTTTAGCCT AGACTTACCT TTAATAGCTT TTGATAAGTT 000480
000481 ATTTTTTAAT GTAATTTTGA TAAAATAATT GTACCTAAAA TGTACTAATG TGTTGGTATT GTCTACTATC CAATCTACGA 000560
000561 ACAAATTTTA CTGATTCATT CGTAACTGAC CCCAGAGTTG GTTTGTTTGA ATCACTGTAA CTGAGCCTCT ATTATAAAGA 000640
000641 TCATACGATG TTTGTTTTAC CTACTTTCCC TTTCCCCTTG TCCTTTTCTT GCTCTATGCG TGCTTGCTTG CATGTCATTA 000720
000721 TTTCAGTAGA GGGTAGTCAC TAATAATTGA TTAACTTCAT ATCCTAACCT ACAGGGGTGC CTGGCAGATT GATGAACTTG 000800
000801 TTTTTCTTTT AAAGAACCAT GATCCTTAGG TTATGCAGAC CTCCTTGATG GTGTCCAGAA ATTTGGGTAG AGGGATGCCA 000880
000881 ACAGCTTTGA TCACTGGGGG AGTTTCATCT CCCATATACC CACCTTACTC ATACAAGTCC CCAGTTAAAT TCAAAGGCAG 000960
000961 GGCAGATTTG AGAGACTGTC TCTCCTGCCC TCTTGCTTTG GTCAAATTGA ATAAACCTTT CTCTGTTCCT GAGTGCTGAT 001040
001041 GTGTCAGTGT TTGGCTTACC ATGCATCAGG TGCACAGACC TAAATTTGGA GATTCTGTAA CATCAAGACC CATATGACGT 001120
001121 TCACATACTG GATTAGGCTG ATGACTCATA TATCTCTCTT TTAATGTGTG ACCATTTACA TCTCTTTCTC TCTCTCCTCC 001200
001201 CTTTTTTTTT TTTTTTTGGC AATTTCTTTG TTATTAATGG TCTTGTTTTA AAGTGAAGTA TTGTCATTTA AGTTTATATA 001280
001281 TCAATGTTAT CATTATTTGT TTATTTACAA CAAAGTTTTA TGCCAAGGCA GTCATGCCAT TACCCACCTG ACCTGCTTTT 001360
001361 CCACCATCAG TTTTACCTGT GTGTGTCCCT GGATCATCAG GAAGCATTGA TTGAGAATCT TTTTCTCTTA ATCTGCCTTA 001440
001441 CTATTTTCTA ATGTAGTTAC TGATCAAACT TAGCAGTAAC CCACTCATTT TGTGTGTAGG CAAAAGCAAC TATGAATAAA 001520
001521 CAGAAGAAGT CTCCCACAGT GGGTAAATGT GTGGACCTGG GTTTGAAACC TGATGAAACT TGCTGGCTGT GACCCCTTGG 001600
001601 GCCAGGGATT AACTGCTGTC ACTCTTAGTT CCCTCAACCC TCAGGTGCAT GTGATTATAT TCACTGCCTG ATATGGTTTG 001680
001681 GCTCTGTGTC CCCACCCAAC TCTCATCTTG TAGCTCCCAT AATTCCCACG TGTTGTGGGA GGGACCCGGT GGGAGGTGAT 001760
001761 GGAATCATGG GGGTGGGTCT TTCCTGTGCT GTTCTTGTGA TAGTGAATGT GTCTCATGAG ATCTGATGGT TTTAAAAACG 001840
001841 GGAGTCCTCC TGCACAAGTT CTCTCTTTGC CTGCTGCCAT CCACATAAGA TGTAACTTCC TCCTCCTTTC CTTCTGCTGT 001920
001921 GATTGTGTAT CCTCCCCAGC CACATGGAAC TGTAAGTTCA ATAAACTTCT TTCTTTTGT
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Predicted Small Protein

Name ENST00000608591.1_smProtein_1283:1450
Length 56
Molecular weight 6617.7553
Aromaticity 0.163636363636
Instability index 86.3710909091
Isoelectric point 5.59149169922
Runs 9
Runs residual 0.0121212121212
Runs probability 0.026506899056
Amino acid sequence MLSLFVYLQQSFMPRQSCHYPPDLLFHHQFYLCVSLDHQEALIENLFLLICLTIF
Secondary structure LHHHHHHHHHHLLLLLLLLLLLLHHHLLLEEEEELLLHHHHHHHHHHHHHHHHHL
PRMN -
PiMo -