ENST00000608591.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000608591.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
antisense |
Length |
1979 nt |
Genomic location |
chr21+:27543189..27589700 |
Exon number |
3 |
Exons |
27543189..27543370,27587064..27587180,27588021..27589700 |
Genome context |
|
Sequence |
000001 AACTGCGCCC GCTCGCGCCG GGAGGGGCCC TCGCGCCCCG CGCCCACAGG TGCACGCGCC CTTGGCGCCG CCTGCACCCC 000080
000081 ACGCGCCCCC TCCGCTCCCC GGCCGACGGC CCACCTGGGC TTCGTGAACA GTGGGAGGGA GAGTCTGGGG CCAGGAGAGG 000160 000161 GACGGTGCAG GATCAGGGAA AGGCTCTCCC TCTGTCACCC AGGCTGGAAT GCAGTGGCAT GATCTTGGCT CACTGCAGAC 000240 000241 TTCGCCTCCG AATTCATGTG ATTCTCCCAC CTCAGCCTCC TGAGTAGCTG GGATTACAGA TACAGGGTCT CACTCTGTTG 000320 000321 CCCAGGCTGG AGAACAGTGG CACGATCATG CGTTATTCAC TGCAGACTTG AACTCCTGGC CTCAAGCAAT CTTTCTACCT 000400 000401 TGACCTCCCA AAGTGCTGGG ATTACAGGTG TGAGCCACTG TGTTTAGCCT AGACTTACCT TTAATAGCTT TTGATAAGTT 000480 000481 ATTTTTTAAT GTAATTTTGA TAAAATAATT GTACCTAAAA TGTACTAATG TGTTGGTATT GTCTACTATC CAATCTACGA 000560 000561 ACAAATTTTA CTGATTCATT CGTAACTGAC CCCAGAGTTG GTTTGTTTGA ATCACTGTAA CTGAGCCTCT ATTATAAAGA 000640 000641 TCATACGATG TTTGTTTTAC CTACTTTCCC TTTCCCCTTG TCCTTTTCTT GCTCTATGCG TGCTTGCTTG CATGTCATTA 000720 000721 TTTCAGTAGA GGGTAGTCAC TAATAATTGA TTAACTTCAT ATCCTAACCT ACAGGGGTGC CTGGCAGATT GATGAACTTG 000800 000801 TTTTTCTTTT AAAGAACCAT GATCCTTAGG TTATGCAGAC CTCCTTGATG GTGTCCAGAA ATTTGGGTAG AGGGATGCCA 000880 000881 ACAGCTTTGA TCACTGGGGG AGTTTCATCT CCCATATACC CACCTTACTC ATACAAGTCC CCAGTTAAAT TCAAAGGCAG 000960 000961 GGCAGATTTG AGAGACTGTC TCTCCTGCCC TCTTGCTTTG GTCAAATTGA ATAAACCTTT CTCTGTTCCT GAGTGCTGAT 001040 001041 GTGTCAGTGT TTGGCTTACC ATGCATCAGG TGCACAGACC TAAATTTGGA GATTCTGTAA CATCAAGACC CATATGACGT 001120 001121 TCACATACTG GATTAGGCTG ATGACTCATA TATCTCTCTT TTAATGTGTG ACCATTTACA TCTCTTTCTC TCTCTCCTCC 001200 001201 CTTTTTTTTT TTTTTTTGGC AATTTCTTTG TTATTAATGG TCTTGTTTTA AAGTGAAGTA TTGTCATTTA AGTTTATATA 001280 001281 TCAATGTTAT CATTATTTGT TTATTTACAA CAAAGTTTTA TGCCAAGGCA GTCATGCCAT TACCCACCTG ACCTGCTTTT 001360 001361 CCACCATCAG TTTTACCTGT GTGTGTCCCT GGATCATCAG GAAGCATTGA TTGAGAATCT TTTTCTCTTA ATCTGCCTTA 001440 001441 CTATTTTCTA ATGTAGTTAC TGATCAAACT TAGCAGTAAC CCACTCATTT TGTGTGTAGG CAAAAGCAAC TATGAATAAA 001520 001521 CAGAAGAAGT CTCCCACAGT GGGTAAATGT GTGGACCTGG GTTTGAAACC TGATGAAACT TGCTGGCTGT GACCCCTTGG 001600 001601 GCCAGGGATT AACTGCTGTC ACTCTTAGTT CCCTCAACCC TCAGGTGCAT GTGATTATAT TCACTGCCTG ATATGGTTTG 001680 001681 GCTCTGTGTC CCCACCCAAC TCTCATCTTG TAGCTCCCAT AATTCCCACG TGTTGTGGGA GGGACCCGGT GGGAGGTGAT 001760 001761 GGAATCATGG GGGTGGGTCT TTCCTGTGCT GTTCTTGTGA TAGTGAATGT GTCTCATGAG ATCTGATGGT TTTAAAAACG 001840 001841 GGAGTCCTCC TGCACAAGTT CTCTCTTTGC CTGCTGCCAT CCACATAAGA TGTAACTTCC TCCTCCTTTC CTTCTGCTGT 001920 001921 GATTGTGTAT CCTCCCCAGC CACATGGAAC TGTAAGTTCA ATAAACTTCT TTCTTTTGT |
Predicted Small Protein
Name | ENST00000608591.1_smProtein_1283:1450 |
Length | 56 |
Molecular weight | 6617.7553 |
Aromaticity | 0.163636363636 |
Instability index | 86.3710909091 |
Isoelectric point | 5.59149169922 |
Runs | 9 |
Runs residual | 0.0121212121212 |
Runs probability | 0.026506899056 |
Amino acid sequence | MLSLFVYLQQSFMPRQSCHYPPDLLFHHQFYLCVSLDHQEALIENLFLLICLTIF |
Secondary structure | LHHHHHHHHHHLLLLLLLLLLLLHHHLLLEEEEELLLHHHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |