ENST00000609366.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000609366.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
784 nt |
Genomic location |
chr3-:107567504..107575966 |
Exon number |
4 |
Exons |
107567504..107567965,107572720..107572901,107573977..107574076,107575927..107575966 |
Genome context |
|
Sequence |
000001 GATGGTTGTG TTTGAATGGA GGCCTTCTGG ACAGGAAAAT ATGGAGAGTG CGTGCTTTGG ATTCAAGACT GGGAATGAGG 000080
000081 GGACCAGAAA CCTATTCTGT GGCTGTTTCT TGTTAGGACT TTCCTAAGCC TCTGGAAAAG TGCAAAGTAC AATTAACATT 000160 000161 TGAGTCTGTC TGAGTCATGA AGAAATGGAG ATTACTGAAA ATAATTCATT TTGGTATCTT CTTACATCCT GAGAGACTAA 000240 000241 TCTTTCCAAG TTCATCTGAG GCTCCTCTTC TCCATGACAA CCTCATCCAG GGATTTCTTC CTGTCCTGGT GTTTTATGAC 000320 000321 ATAATCACAT CCTTCCTGAG ATAATGAGCA CACAATTGCC TGGATACCTG AAGGAATGGA GACAGCGGCA GAAAACACTG 000400 000401 CAGAGAGGTG GAAACATCCG TTAATATTTT AAAATCCCAT TACTGCTACC AACAATAATA ATGGATGCAT AGAAATAGAT 000480 000481 CTGGATTAGC TGAGCTTGAA ACAGTCCATC TCACACACAC ACAAAAGAAT TTCAGGTAAT GAAGAAAAGA AAAGGAAAAA 000560 000561 AATAACACAT GGCCTCTGTA ACATTGTTGC TTTTGAACCT TATTGGATTT GTGGCAAACT GGGTGCTTTT GGGACATGAG 000640 000641 TCTCCTACCA CTCACCTGCC TCTGAGCTCT CCTCTGAGGC CGGTCACTGC CCAGAAGGGA TGCACCTGTC TTCTGTCCTG 000720 000721 TGGTCTCTGG GTAGCCCCTG GGTCAGCATT TTGGGTGCTA GCATCTGATG CAACTGCTAC AGTT |
Predicted Small Protein
Name | ENST00000609366.1_smProtein_176:343 |
Length | 56 |
Molecular weight | 6521.7593 |
Aromaticity | 0.145454545455 |
Instability index | 49.9310909091 |
Isoelectric point | 9.51934814453 |
Runs | 11 |
Runs residual | 0.0484848484848 |
Runs probability | 0.0318286200639 |
Amino acid sequence | MKKWRLLKIIHFGIFLHPERLIFPSSSEAPLLHDNLIQGFLPVLVFYDIITSFLR |
Secondary structure | LLHHHHHHHHHHLEELLLLLLLLLLLLLLLHHHHHHHHLLLLHHHLHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL |
PiMo | oooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTii |