ENST00000609500.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000609500.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
594 nt |
Genomic location |
chr4-:56233177..56247059 |
Exon number |
4 |
Exons |
56233177..56233330,56241038..56241200,56243774..56243953,56246963..56247059 |
Genome context |
|
Sequence |
000001 CATGTCTTAA AAGCAAAATC ATAGAAGGAA ACTCTATGGA CAATTTCAGA TGGAGAAGAA GAAAGGACTG GAAGTTCAAT 000080
000081 TTGGCCATGA CAATTAGTGA TGTTTGAACA AAGACTTGAA GAAGCTGAGT GAGAAGGCCA TGCAGATATC TTGGAGAAGT 000160 000161 GCATTCCAGG CAGAGGAAAA GCCAGTGCAG AGACACTGAA GCAGGGCATG ACTGATGTGT ATAAGGAGCA TCATATACAT 000240 000241 GATCATCTAC AGTCCACTGA GGAGAATAGC AGACGAGAGG CCAGGTGCAG TGCATGTAAT CCCAGCACTT TGGGAGACTG 000320 000321 AGATGGGAAG ATCGCTTGAG GCCAGGAGTG CAAGACCAGC CTGGGCAACA CAGCAAGACC TTGATTCTAC TAAAAAAAAA 000400 000401 AAAGGATCCT TCAACTTCAA CAATAATAAC ACAAGGGAAG TGAAGAAAAA CACTTTCTAA GGAAATCTCT CTCTGAGCTA 000480 000481 CCATCCTGCT AGGGAGAGCC TGAAAGCAGA ATGCTGACTT GACTAGCTCT GGTCAATGAA AGAAATCACC AGTGGAAAGG 000560 000561 CTACCAGGGG GCTTTCTCAA AAGAGAGGGA CAGT |
Predicted Small Protein
Name | ENST00000609500.1_smProtein_35:106 |
Length | 24 |
Molecular weight | 2986.4348 |
Aromaticity | 0.173913043478 |
Instability index | 76.4913043478 |
Isoelectric point | 10.8342895508 |
Runs | 5 |
Runs residual | 0.0103519668737 |
Runs probability | 0.00531708178768 |
Amino acid sequence | MDNFRWRRRKDWKFNLAMTISDV |
Secondary structure | LLLHHHHHHHHHHHHHHLEELLL |
PRMN | - |
PiMo | - |