Lnc-SLC9A11-2:1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
lnc-SLC9A11-2:1 |
Source |
LNCipedia2.1 |
Same with |
NONHSAT007628 |
Classification |
intergenic |
Length |
5619 nt |
Genomic location |
chr1-:173204199..173446294 |
Exon number |
3 |
Exons |
173204199..173209162,173431463..173431593,173445771..173446294 |
Genome context |
|
Sequence |
000001 GCGGCGCGAG CTGGACTACC GCGGTCGCTG TTGGTGGCGC CGCCGGGCCT GCGACTAGGT GGCATCCTTC AGACACTATA 000080
000081 GGCCGTCTCT GCACACGTGA TGCGGGGCTC GGTCACGTTG CCCCCTGGAA GCTTGAGGAT GCGCCAGGTT TGACTCTGCA 000160 000161 GGGCGTACGC GCTTTAGGGA TGGAAGGAAG AGGAACGCGG CAGGAAGGCG AGCCCCAAGG TGGAGAATCG CCTGGGCGCG 000240 000241 CAGGCTGCGG CGGCTTCGCA CAGCCGCCCT GGGCGCTGCA CGGGTCCGCG CGCACCCTGC TGCGCACCCA CTCGCGGCCA 000320 000321 GCTCCCTACA GAGGAGTGGA GTGACTGCTC GACTACCACC CCTCTTTTAG TGTGAGCGTC TGGAGTCCTG ACCGCCCCAG 000400 000401 CCAGCCCAGC TACGATGAAC TGTCTAAGAG GATGTGGCAA GACCCAGAAG TATGGGTGAC CTTATGTCAG AGGAAGTGGC 000480 000481 TTTCTTATTG CAGCAAAAAT TCCCGTACCA ATGTCAGTGC TAGGATGGAG TTTCACTGTG TCACCCAGGC TGGAGTGCAG 000560 000561 TGGCACGATC TCAGCTCAAT GCAACCTCTG TCTCCTGGGT TCAAGCAAAT CTCCTGCCTC AGCCTCTTGA GTAGCCTGAG 000640 000641 TAGCTGGGAC TAAAGAGTCG TGCTCTGTCA CCCAGGCTGG AGTACAGTGG CGTGATGTCT GCTTACTGCA GCCTACACCT 000720 000721 CCCAGTTCAA GTGATTCTCC TGCCTCAGCC TTCCAAGTAG CTGGGATTAC AGGTATTTGC TACCAAACCT GGCTAATTGT 000800 000801 TTGTGGTTTT AGTAGAGATG AGATTTCATC ATGTTGGCCA GGCTAGTCTC GAACTCCTGG ACTCAAGTGA TTCGCCTACT 000880 000881 TCAGCCTCCC AAAGTGCTGG GATTATAGGT GTGAGCCACT GTGCCCGGTC CCACTGAGCC AATTCTCTTA TTGCCACTTT 000960 000961 GGACTCCTCC CAGTGAGGAC AAATAGACAC TGAGGACATC ATGATATGCA GAAAGAAACT TGGAGTGCAA GACAAGAGAC 001040 001041 CTGCACCTTT CTTTCAGCTC CGTTCCAAGC TGCTTGATCA CAGACATCTC TTCTGTTAGA TGAGGATAAC AGGATCTGCT 001120 001121 CTACCTGCCC TGGAGGATCT TTGCAAGAAT GAAGTTAGGG GGAAAAAAGT GACAGAACAT ATTGAAAACT TTTCATAAAT 001200 001201 ATCAGATGCC TTATTTGTTG TGACACTATG GGTGGACAGA TGATTTCAGT TGAGAGAAGA ATTAAGATTC CTATGCCCTG 001280 001281 CGTTTAACTG GGTCTTGGTT ACCCTGAAAG ACTGAGAGAG CAAAACCCAA ATATAGAGGG AGTTTTTCTT AACTGTCCTC 001360 001361 CCACCATGGC TTATTTGCTT CCTTCTGAAA GTTCAAAATT GATGCTATTA ATTTGGGGTG TCAGCAGTTA TTAATGGATC 001440 001441 CTTGGGCCAG CAGATTTTTG TTCCTGCTCT GGAGGGCAGG CATAACTCTG ATGTGAATTG GACGTGTTGA ATACTGGAGT 001520 001521 GGATTACTGA AAGAAGGAAG AAAGGGAAAG TTGCATTTCT TGAGTGCCAA GAATGGATAT TTGAAACTTC ATTTAATTAT 001600 001601 ACAGTAGTTC AGTGAGGTAG CAATCACCAT CAACATCTTG GAGATAACAG GCTCAGGGAA GCTTAACATG TTCTCAGTGA 001680 001681 CAGAACATCA TACACACAAA GTGGCAGAAT TGGAGTTTGA ATTAGAATGA TGCCAAAGCC AATTATTTTG TTCTCTATCC 001760 001761 CCCTGAGGTC TTAGGGCTCA TCTAATACCC TTTTTTTGGC CTCTAAAACT TCTCCCTGCA TTTTCAGGTG AGAAAACTGA 001840 001841 GTTCACTCCA CAATGACTGA ACTAATCTAC ACTCCCACCA GCAGTGTATA AGTGTTCCCT TTTCTCTACT ACCTCATGAG 001920 001921 CATCTGTTAT TTTTTGACTT TTTAGTAATA GCCATTCTGA CTGGTGTAAC ATGGGATCTC ACTGTGGTTT TGATTTTTAT 002000 002001 TTCCCTAATG ATTAGTAATA TTGAGTATTT TTCATGTTTG TTGGCCGCAT GTATGTCTTC TTTTGAAAAG TGTCTGTTCA 002080 002081 TGTCCTTTGC CCACTTTTTA AAGGGGTAGT GTTTTTGCTT GTATGTTTGT TTAAGTTTCT TGTACATTCT GGATATTAGA 002160 002161 CATTTGTCAG ATGTAGAGTT TGCAGATATT TATCTCCCAT TCTGTAGGTT GCCTGTTTAC TCTGACAGTT TCTTTTGTTG 002240 002241 TGAAGAAGCT TGTTAGTTCA AGAGCTTCTT TAGGGTCCCA TTTGCCAATT TTTGCTTTAT TGCAATTGCT TTTGGCATTT 002320 002321 TTGTTGTGAA ATCTTTGCCA TTTTCTATGT CCAGCATGGT ATCACCTAGG TTATCTTCGA GGGTTTTTAA ATTTTTAAGT 002400 002401 TTTGCATTTA GGTCTTTAAT TTATCTTGAG TTGATTTTTC GATATGGTGT AAGGAGATTT TCAATCTTCT GCATATGGCT 002480 002481 AGGCTGTTTT CCCAGCACCA TTTATTGAAT AGGAAATCCT TTTACCATTG CTTGTTTTTG TCACCTTTGT CAAAGATCAG 002560 002561 ATGGTTGTAG GTGTGTAGCT TTATTTCTGG GCTGTCTATT CTGTTCCATT GTTCTATGTG TCTGTTTTTA TACCAGTACC 002640 002641 ATGCTGTTTC GGTTACTGTA GCCTTGTAGT ACAGTTTGAA GTTGGGCAAT GTGATTACCC TAGCTTTGTT CTTTTTGTTT 002720 002721 AGGATTGCCT TGGCTATTCT GGCTCATTTT TGGTTCCATA TGAATTTTAG GATAGTTTTT TCTAGTTCAG TGAAGAATGT 002800 002801 CATTGGTAGT TTGATAGGAA TAGCATTGAA TCTGTAAATT GCTTTGGGCA GTATGGCCAT TTTAATGATA TTGATTCTTC 002880 002881 CTATCAATGA GCATGAAATA TTCTTACATT TGTTTGTGTC ATTTCTGATT TCTTTGAGCA GAGTTTTGTA ATTTTCGTTG 002960 002961 TACAGCTCTT TCACTTCCCT GATTAGCTGT ATTACTAGGC ATTTTATCCT TTTTGTGGCA ATTGTGAATG GGATTGCATT 003040 003041 CCTGAGTTGA CTCTTGGCTT GGATGCTATT AGTGTATAAG AATGCTACTG ATTTTTGTAC ATTGATTTTG TATACCAAAA 003120 003121 CTTTGCTGAA CTTGCTTTTC AGCCCAGGGA GCTTTTGGGC TGAGACTATG GGATTTTCTA GATATAGAAT CATGTCATCT 003200 003201 GCAAGCATGG ATAGTTTGAC TTCCTCTCTT CCTATTTGCA TGCCTTTTGT TTCTTTCTCT TGCCTGATTG CTCTGGCCTG 003280 003281 GCTCCTATTA TTTTAAAGTA TGTTCCTTGG ACGTTGAATT TTATCAAAAG CCTTTTCTTC ATCTATTGAG ATAATCATGT 003360 003361 AGTTTTTGTC TTTAGTTCTG TTTATGTGAT GATTCACATT TATTGATTTG CATATTGTAT TAGTCTGTTC TCACGCTGCT 003440 003441 AATAAAGACA CACCAGAGAC TGGATAATTT ATAAAAGAGA GGTTTAATGG ACGCACAATT CCACATGGCT GGGGCAGTCT 003520 003521 CACAGTCATG GTGGAAAGCA AAGGAGAAAG AAAGGCACAT ATTACATGAC AGCAGGCAAG ACAGCTTGTG CAAGACAACT 003600 003601 CCCGTTTATA AAACCATCAA CTCTCATGAG ACTTATTTAC TACCATGAGA ACAATATGGG GGAAATCACC CCTATGATTC 003680 003681 AATTATCTCC ATCTGGCTCT ACCCTTGACA TGTGGGGATT ATTACAATTC AAGGTGAGAT TTTGGTGGGG GGACACAACC 003760 003761 CAACCATATC ATGTATGTTG AATGAACCTT GCATCCAAGT GATATCAAAC CTCTTCCTAA TTCCCTTTTC CTCCTACCCT 003840 003841 TCCCAGTCTC TAATATCCTC CATTCATTCT ATTTTGTACT CCTGTGAGAT CAACTTTTTT TTAGCTTCCA CATATGGGTA 003920 003921 AAAATATCTG GTGTTTAGTT TTTTGTTCCT GGCTAGTTTC ACTTAATATT ATGTCCTCCT GTTCCATCCA TGGTGCTGTG 004000 004001 AATGGCAGGA TTTTATTGGT TTTATGGCTA GATAATAGCC CAGTGTGTAT ATATACCATA TTTTCTCCAT CCATTCATCT 004080 004081 GCTGTTGGAG ACCTAGATTG ATTCCATATT TTGGCTATTG TGACTAAACA ATAAACATGG GGTTGCTACA ATAAACATGG 004160 004161 GGGTATACAT GCAAAACATT TCTTAACATC TTTTTTTCTA ACTCTTCTAC CCCTTATTTT ATCACCAAAC CCTGCACTAT 004240 004241 CTCCTGTTTT TTTTTTTTTT TTGAAATAAC TGGTGCTTGC TTTACAGGAA GCCCCAGAAA ACACTGTGCC TTGGAATTCC 004320 004321 TAGGCACTTA ACTTACAAAT ATAATGGAAC CAAGGATCAG AAGCTGGATT TGAAGACATT GCAAGGAAGG TGTTTCCTAG 004400 004401 AGTAATCTAT AGATGGAATT GATTCTGTAG AAAGGTGATA AACCCTGACC ATTGAGTGTT GAAGCTAAGA TGAGGAGACT 004480 004481 ACTGGTAGAA ATATTCAAAA GTAACTAAAA CACATAGGTG CTGGGGATGG ATGGTTAGTC AGATTATTGA CTCTCATGGC 004560 004561 TTGTAATTAG TTTGTGATCT GAATTTAAAT TACTTAGGAA AGGAATGGCT TTTCAGCAGA AAAATATATG CATCAATAGC 004640 004641 ACCTACCAGT CCCAACAAAT GATTCTATAT ATTTTTTTAA GTTGGTGAAT TTTATTATAT TTTGCCACAA TTAAAAATAA 004720 004721 AAAATAATTT GAAGGGAAAT GATTTTAACA AATAAAATAA ATGGAGTGGA AGGAAATATG GAGGGTTAGT AATCAACAGG 004800 004801 CATTAAGTCC AGCAAGATGA ATAAGCTCTA GAGATCTGCT GAACGACATG GTACTTATAG TCAACAATAA TTTATTGTAC 004880 004881 ACTTAAAAAT TTGTTGAGAT CTCACGTTGT GTTCTTGCCA CAATACAGTA AAATAAAAAT AAGTTTTACA CATTTTTTAA 004960 004961 AAGGTTATAC ACCTCATAAA AGTGATAGAG AAGGAGACAG CCAAATGCTG CCCAGGCCAT TGTGCACATT GAGCTTATCT 005040 005041 AAACATGCCC ACAGTGAAAA ATTCTGTCCC TTAACACATG CGTAGTATGT GTAGACAAGC TCCTTGGGTT TTCCTACTTT 005120 005121 ACTGTGCATT ACAACTCATG TGTCAAGTTC AAAGACATTC TGTCCCTGAA CACATGCATA GTAAGGGAAA TAAATCAATA 005200 005201 TGGAGTGGCT CAGACTAAGG GCCCACCTGT GCACTGGGAC AATGGGGTGG ACCCACCTGG AATCCACGCC TTATAAATTG 005280 005281 GGGAGAAGCC TGGCCTTTTC AGCTCATGTG TGGTGGCCTG GTATTCAATC TGTGAGGTGG AAGCCTGTTG AAAGGTCCCC 005360 005361 CTTTTTTCTC TGAGAGCTTT CTTTTAATTC TGCTCTCTCC ACCTTTCAAT GTGTCCACGT ACCTAATTTT TCCTGGTTGT 005440 005441 GACACAAGAA CCAGATTTTA GCTGAACTAA AGAGCAAAAA ATCCTGCATC AAAAGGAGAG CCAAGACTCA AAAAGAGAAA 005520 005521 CAGTCTTTCG AATTTTTCAT TGATTTTAAT TCAGTGACTT CTCTGAACAA TAAAGTTGCA ACTTATTTGA ATAAAAACAC 005600 005601 TCAAAATAAA GGGAACACT |