Lnc-SOX2-1:11

Same as ENST00000492337.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000492337.1
Source	Gencode19
Same with	lnc-SOX2-1:11
Classification	intergenic
Length	2508 nt
Genomic location	chr3+:181328151..181459018
Exon number	5
Exons	181328151..181328533,181328649..181328717,181417386..181417671,181432973..181433080,181457357..181459018
Genome context
Sequence	000001 AGTGCTGTAT TGTTGAGTTT TGTATGAACT AATCTAGCTT CTCTAAAAAA AAAAAAAAAA AAAAAAAAAA GAAAGAAAAG 000080 000081 AAAGAAAGAA AAGAAAGAAA GAAAGAAAAA AAAAGAAAAG AAAAAAAAGA GAACCACAGC TTTGGACAAA AGTCTATAGC 000160 000161 CAGTGCATTT GAAAACTCCC CTTGCACCAG GGCTGACTGT AGCTGGGGGA AGACATTTTA CTCATTTGCT CTTTCCTTTC 000240 000241 ATACAGTCAG CTGGTCCCTC TTCTCAGGTG TAGATCACCT ATTATAATTT TACCTAATTT TGATACTCTG ATAAGGAAAG 000320 000321 TCCCAGGACT TATCAGCTGG GATAGGCCTC ACTTACAAGA CAGCTCTGTT CAGTATTTGG AAGAAAGCCT GACAGGTTTC 000400 000401 TTCGGAAAAG TGGCCATCCA TGGAATGAAT GAAATGTTCT CTTTCTATTC CAGGGATTGC AGTGGCAAAG CTAGGCTAGG 000480 000481 TCTTGGAGGC TGGTGTAAGG CGATGTGGGT GAAGGCAGGA GGCTGATGGA AAGACTGGGG GGAAGAAAAG CCGAAATGGA 000560 000561 TTCACGGTGC CTTGGATGAA GGACGAGAGG GGAACTGCAA GCTCCTTCAA CTGGTTCTGT CCGGTGAGAA GTGATCAAGC 000640 000641 TTGGGCTGAC AAGAGGCTCA GGGAGCCCTC ACGTTCTTTC GCTTTTTTAC CTGCCAATCA AACTGCTACA AGACAACACC 000720 000721 CTGATCTGGC ATGGACATCG CGGGTCCAAG CCTGTAGCCC CAAATCGGAT AATCTCTGCA GCTGATAACA AGCAAAAGAG 000800 000801 AAGCCAGGCA ACAGCCATAT TAAAGAAGAA AACAATCAAC TCTGAGATCC AACTTAGAAA TAATGTTTCA TTCAAGATAA 000880 000881 GGCTCGTGGC TTAGGAGATT GTGACCTGGC TTGCATCATT CTAAGACTTC TATCGTCTGT TTTCAAAACC CAAGGAGGAC 000960 000961 CTCCTTTTCT GTGTGATAGT TCCTCATGCT TTGCCAGCCA CTGGGTCTTT AAGGAAGCTT GCCAAGAGTT CCCGGCTGGG 001040 001041 AAGGACAGTT CGAGTTCATC ATAGACAATG AGCTGGCACC ACAGTTTAAG TGACTCACCA ACCTGGTTGC CCACTTCAAA 001120 001121 ATGTCAAGAA CCACACTATC TAATTGAAAG AACTGTGTTT TAGCAAAGTG TAATTGGATC GCCTGGCAAG ATCATCTCAA 001200 001201 ACTATGTCTC TGACCTTGCC TTTCAGTGGC TATTTTGAGC ACAAGAGGAG AAAGGAAATG ATTCCTGAAT TATATCTTGT 001280 001281 TTTTAAAAAT TAAGATTAAT TAATACTTGG TTTTATGTTC ATTCCATTGT AGGAACTTAG TGATTATTAC AAAACAGTCA 001360 001361 AAATAGGTCA TAGCAAAATG AACGTTTAAG ATTAGGTTAA AACATTCCTC TGAAATTTTA GTATTCACTT TTGAAGTGTC 001440 001441 AATTACTATA TTTCTGTAAT TTCTCATTTT TTTCTTGGCT TAGAGTCAAG ATGAAAAATG ATATTTGAAT CAAAGACATT 001520 001521 GTTTTGTTAT ATAGCCACTC CTTTCTAAAA TGCAAATCCA CCCTCCCCTC ACCAATGCTT TATTCTTTGT GCGCGCACAC 001600 001601 ACACACACAC ACACACACAC ACACACACAC ACACACAGAC ATACACAGAA CCAGCACCCA AATGGTAGAG GAGGTCCTTC 001680 001681 CAAGACTTCT AGGACCTGGA TCATGTAAGC AGTAGATGAG AAAATGAAGT AAGAGATATA GAGTAATAAC AATAAAAGTC 001760 001761 AATGATTTCA TTTTACAAAA AAGTCATTGT GTAGTACTCA GATATTTTTA AGAGCAAGTA TTATTATGAC TAAAGTATAT 001840 001841 TATACTTCTA AATTATTATG ATTCTCATCT AATTTCAAGC CACACATAGG CGCCATTTGA AAGCATTTTG TGTTACAACC 001920 001921 TATCAACAAA AATCAACTAA TAGTTTTATA ACGTGCATAG GTTTACCCCA TGGGGAATTA AAATTTTTAT CTGCAAGTAT 002000 002001 TTCTGTTGTT GTGAGACTTT AGGACAAGAC AACATTTGGT GTTAACATAG AAGAATATTC TATGGCTTTT TTAGCTTTAA 002080 002081 AGTTCATTAC TCTAAAATAA AGTACACGTG GTATTTTTTT CTTCCTAGTG TTCTCTTATT ATATGTAGAG TATTTTCGGT 002160 002161 TGTTGTTTTT AACGTATACA TTATTTTTAT TAAGTCATTT CATAAAAGAT AAGATATATA CTAATAGACC CTTGG