Lnc-VSX1-1:8

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-VSX1-1:8

Source

LNCipedia2.1

Same with

NONHSAT079131

Classification

intergenic

Length

2559 nt

Genomic location

chr20-:25121434..25128629

Exon number

4

Exons

25121434..25123467,25124004..25124149,25124915..25125059,25128396..25128629

Genome context

Sequence
000001 TGAAGGGAGT GAAGCGGAGG CCCTGCTGGA GGCAAAGGTC AGCGCGGCCT GATTAGCCTC CCACGGTGAC TTGGGAGGTG 000080
000081 ACTCGGGAAT CCGGGCCCTC TTCTACCTGT GGCGCCGTCC AGCCCTGGTC CCCCAGGCTG TGGCTGCAGC CAGTGCGTGT 000160
000161 AAATGGAAGA ACCCCGTGAT GATTTTTCCT TGGGGGAGAT AAACCCATGG ATGGGGTCTG GAGCCACAGG GACGGATTCA 000240
000241 AGGAGATTCA AAACCCGTGT CACTGCTGCC ATCTTCCTAG AATCCCTTTA AATCCTCATG GATTTGCTGA CATTGGGAGC 000320
000321 ATCCTGAAAG AGTCCCCATG CTAGGGTGGC TGCAGTAACA GGTACAATGA GAAATGATGG TTCTCCCCAC TCCAGAAAAA 000400
000401 ATCAAATCAG ATTGTGAATT TATTCCCTGA CATTAACACA CGGCATTACA GGAGCATGTA CATCACATGG TCAATTTATT 000480
000481 GGCATGAGGA TTATGTCATC GGGGAATAAA TGGGAAATTC TCAAGGTGGC CCAGGCCTGT AGGCTTCCAG TGAGAAAACT 000560
000561 GGAGACCACA CTCACCCGTC CCACTGCCGT TTCTTTGGGG CTGCCTGTGA TACTGGGTTA TTCCCCTTGC CGAGTTCCAC 000640
000641 TGTGCTTACC CTGTTGGAAT ATGATGGTGG ACTTGCCAGA GGAGATGACC ATGATTTTCA GGAACAGCAG CCCCTCCTTC 000720
000721 CTGGTTGAGG CAGCCAGCAG GCACTCCTAT CCATGAGCCA CAGCTCAGCT AAGGCAATCC AGTCCAGCTG CATGCCCTCT 000800
000801 CTCTGCTTCT GGGGAGGTAG GAAGGACCAG GGGCATTCAT GCTTGTTTCT AGGGGGCCCT AACTGGATCT CTGGATCAAG 000880
000881 ACCTACTCAG GGGAGAAAGA CTACTCTGGG TTCCATGTTA GGACTGACGG GTGCATCTTA ACTGAGATGC AGACAGTGGA 000960
000961 CAATTCGAAC TCTGACCTGA GAGCAAGCCC CAGCCTTGGT GCTCATAAAT GCTCCGCTTG GTCCTTCACA TTTGTGTTCC 001040
001041 ACACAGGAGA AGCCAAGTTG TGAGCAGTGC ACCTTCACAA GCAAAGCCTC GACTGAAATC TTCTCTAACA ATTGGCTGGT 001120
001121 CACTCCTGAG CGTAATCTAC CCCTTCAGAA CACTGGGGAT GAATTTAGAG ACATCGAAGC CTCCTGATGA GAAATACGTG 001200
001201 TCCACTCACC GGGAGAACTG AAATACCAGG AGATTTCTAC ACAAATCTCA CAGAGTCCTT CTGGCGTCCT AGGGGTTTGC 001280
001281 TCACATATAA GGGACTTTCT GGTAGGAAGA GAGTCTCTTT ACATTCTTTA TTATATGATC CTGGTGGCTT TGTAGAGAGA 001360
001361 TGGTACAGCT GACAGATCAT GTCCTGTGGG GCCAGGGAGT TGTGTGTGTG TGAATGCTCT GTGAACTTGG GCAAACTACT 001440
001441 TAGCCTCTCT GAGCCTTAGC TGCATCAGCT TTGAAAAACA GGATGATAAA ATGGAGTCAC CTTATTTGAC TTTTATAAAT 001520
001521 ACACTTACAC AATTACACAA GTTGTGGGGA TGGGAAGAGA GAGTTGGGGA AAGAGAAATG AGAGAGAGAG AGAGAGAGAA 001600
001601 TGAATGATAA ACAATTTAAA CAACAGTGGG GTGTAGACCA ACGCCCAGCC TGGCAAGGGT GAGCCCAGAG AGCCTTCCCT 001680
001681 CCTGGCTATT GGCAGCCTCC GCATGGAAGC CTGTCGTTGA CTTCTTAATG ATGAGAGATG TTCTGGGGGC ACTCCAGGAT 001760
001761 TCTTGGACAT GGGATCGTCT TCACAGCTGT GTCTATTGAA AGCTGAAGTT TCAGTCTCCC CTGCCCCCTG CCCCCTGGAG 001840
001841 TGGCTTCCCA GGGGAAATTC AAGGGCACCT GTGACTGCAT GGCTGCTTTC CTTTCCTTTA CTCAATGCCG TCCTTTGGTG 001920
001921 ACAGCCGTGT CTCATGCCAG GATACATGAG GTGCTCTATA GTAGTATGTT TTCCCTCCTG GGAGGTAATT TTATTTAAAT 002000
002001 GTGAAGTCAA AAGGATCACT AAATAGAACC ATGAGGCAAC CACTCTGGGC ACCTGCCTGG TGATATCCAC AAGAGCTGAC 002080
002081 CACAGGTGCC CCCTGTGCCC AGCAAGTCCT TGGCTGGGCA GTCACACAAC AGGCATGGGG ATGTGTGGCC ACCAAGCCCT 002160
002161 CCAGGGCAGT GCTATTTGTA ATAGTCCCAA ATGGGAGAGA TGGCAAACGC CCGCCAATGG GGCAGCATGG ATAAATGGAT 002240
002241 GCTGCACAGC AACGGCGATG AGTGAGCCCC AGCACCCGTG AGCTCACCAG TGTAATATTG GGTGGAAGAA GCCAGGAGGA 002320
002321 AGGGCATTCA CATTCTGTGA TTCCAGCTAC ACTATGTTTA AATATGGGCA GAGCTAGGCT GTGGTGCTGG AAGCCAGGAC 002400
002401 AGTGGGATCC TTGCATGGGG GTGATGGTGC TGGTAGGTTC TGGTAATTTC CTCTTCTTGA TCTGGGTGTA AACATTTTGT 002480
002481 GAAAATTCAA TGAGCTGTAC ATTTATGACT GGTACATTTA TGACTTTGTA TGAATATTAT ACTTTCATAA AACTACTTT
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