NONHSAT000877

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT000877

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

2706 nt

Genomic location

chr1+:11128528..11133154

Exon number

2

Exons

11128528..11128770,11130716..11133154

Genome context

Sequence
000001 AAAAAAAAAA AAAAAAAAAA AAAGTTTTAT GAGTTGCTGG GGTAGCTGAT CAGTACTGTC TGCCCTTGGG AAGAAATGAG 000080
000081 GTGAGGAAAA AGATATGCAA AGGAATGGAC TCCTGGATGG GCCTGTCTTC TCAGCAGAGG AGGAGGTCAA AAACAGGCGC 000160
000161 CACCAGCGTG CTAAAATCCT CCAGGAGCAG TTCTTACCTT GCCAGACGGG GTCTGTTTAT TTGGATCAAA CTGAGAAGAA 000240
000241 ACTTTGGATT TGCTGTTTCC TGAAAGTTGA GTGGTCTGGC ATATTTACCA TAAACACAGT GGAAGAAGGT TAAGAGGAAT 000320
000321 TACAATATCA ATCTTGTGGA GGTTTCGGAA ATGAGGTAGA CACTAATAGC CAAGCTAAGG TGAACCGGAA AGAAGTCAGG 000400
000401 ACTTAATATA AAGCACAGGG CAAGCCCCCT AAGATATCCA AGGAAGATCC TGACCACAAG CAGGGGCATC GTTTTTCAAA 000480
000481 GGAAAAAGGA GAAAAGCTGG CACATACCAC GACCTGCTGT CGGACGGAGA TGGCCTGTTC TGCTGCAGCT TTGCACGCCT 000560
000561 CCTTTGCCTG TTCCCGGGCA GCTGCAAGGG AGAGAACTTG TCTCTGGAGT TGGTGAATCC AGCAACCACC CTCCCCTCCA 000640
000641 TCTCCATCCC CCTCCGACTT GGCCTAGCCA CAGGGGTTGT CACGGCTGAT TCCTCCTCCC TCTCAGGTCC CCGGTCCCCC 000720
000721 ATCTCTGCAG GACAGGCTGC CTCAGAGCTC AGGCTCAGGT GCTCTGCCCA CCTTCAGCTA CACGTGAGCT GATCCTCCCC 000800
000801 AGCCCTGCCT GCTCCTCTTC TGTGAACCTA AATGCTCAGT GGCCTGTGGA CCTGAGGGCG TTTAACAGGA TCGTCACCAT 000880
000881 CACCATCGTG GACAAACCTG CTCAAACCAG CTACTTTGGC TGCCAGCAAC TCCAGCTTTC CAGCTGCTCA GGACAAAACC 000960
000961 TTCATCCAAG GTTCCCTTCC CTTCTCTCAC ATGCCACATC CACCTCATCA TCAAATGCTG TCAGCTTTGC TATGGGACAG 001040
001041 ATCAAGGCTC TGACAGCTTC TCACCACCTC CTCTGCTCCC ACGCTGGTCT CAAAGCCACC ATCCCCTCTC GCCTGAGCCA 001120
001121 CTGCCATGTC TCCTATCCCT TCCTGGACTC CCATCCTGTC CTCTATAGTC TACTGTTGAC ACAGCAGCCA GAGTGCCACA 001200
001201 TGTCAGTCAC TTCCCCCCCT GTCTGCTCAG CACCCTCCTG GCTTCTGAAC TCGGAGTAAA AGGCAGCGTC ATCCCGTGGG 001280
001281 CCTCTGCTGG CTCCTTCCCC ATCTCCTGCT CTTCTCTACC CGCCTCTGCT CATGCAGGCC CACTTGCTGC TGCTCAGCAT 001360
001361 GCCCAGTGAA CTAGCCCCAG GGCCTCTGGG CTCGCTGTGC TGTGGCTCCA GAACTCTTCT CTAGGTCACT GCAGGTCTCG 001440
001441 TCAATGTCGC ATTCATTAGA CTGCCTTCTC CAACCACCGA GACAGCTACA GCACCTCCAG CACTCCCCAC CAATCTCTCT 001520
001521 GCACAGCACC TGCTGCCATC TGCCAGGATA GATACTGATT GCCCACCATC CCTCAGCAGA AGGGAAGCCC CACAGGGGCT 001600
001601 TCATTCATCG CCGTATCTGG CACTTGGCTG AAACAGCGGG TGTGCAACAG CCATTCTTTA ACAGCCGACT GAGTTGCAAG 001680
001681 GAAGTGAGTG TTACCTGTTT GCTCAGCTGC CTTCTTCTTG ACAGCTTCTT TAGAGTCTTT TTGTACTTGT ACCTGGGCCA 001760
001761 GCTTCCAACG GTTGCTGATC TATAATGAAA GCAAATATAA CAAAAAAAAA CCCTCCAAAG TCAGCCACCT AAGTCTGTCT 001840
001841 TACTTTTCAT GAGGTGACGA AGGGCAGGTT AACCTAAGAA GTACACACAT TCTAAGTCAT AAATTTTCAA ATCTAAGGGC 001920
001921 ATGAAAAATA AATTTCATGC TGGCTTTATT GCTAAAATCC CTATTAAGGA CAAAGTGCTA CTGTCCTCCA GGCACTGGGC 002000
002001 CATCCATCAT CTCATTCAAT CCCTCTGTAA CCCTGGGAAA AAGGTACTGT CATCACCCTC TCTTTAGAGA TGAGCAAACA 002080
002081 GACTCCGGGA GACTAAATAA CTTGTCCAAG GGGCATGGTC AGTAAATGAC AGAAGCAGAC TCAAGGCTGG GCTTCCGCAA 002160
002161 GTCTGCTGTG TTTCTTTATG ACACCCCACT GACCTATGGC GTTACAACAC ATGGAGGTGA CACTGGGCAT AACACACAGG 002240
002241 ACGTGCAGTT GTTCAGTGTG ACATAACCCG TGGGGGGAAA AGAGGAGAGA AGGCAGAAGC CCCACCTGAT TCCCCATTTC 002320
002321 CAAAAATAGC AAGCTAACTC AGGGACAGGA ACAGGGCTGG GGGACCTCTC GGTTTTGCCT AACAAAAGAG CTCTGCTGCC 002400
002401 ACACAGAGGA AGCCAGTCGC CCATGTCATC AGAGCAGACG CTTCCTAAAG GGAGGAAGGA GGCTGCGAAC AACAGTTCAC 002480
002481 GTTCTGGCTC TGGGGAACAT CTCAAGAGGG TCTAGGCGAG GTGTGCTCTC ATTCTTACTC ATAATGCTGG TAAAAACAAG 002560
002561 CCAGATAAGT AAGATAGAGT GTTTTAAAAT TAAAGCTGTC ACCTTTAAGA GCCTTAAAGT AACAGACATC TATAAAAATG 002640
002641 CATCAAGCTG TATATTTAAT ATTTGTGTAC TTTACTACAT ATAGATTAAA CCTCAATTTA AAAACC
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Predicted Small Protein

Name NONHSAT000877_smProtein_1031:1258
Length 76
Molecular weight 8176.3921
Aromaticity 0.0533333333333
Instability index 67.3906666667
Isoelectric point 7.04071044922
Runs 9
Runs residual 0.0289361702128
Runs probability 0.0314333941785
Amino acid sequence MGQIKALTASHHLLCSHAGLKATIPSRLSHCHVSYPFLDSHPVLYSLLLTQQPECHMSVT
SPPVCSAPSWLLNSE
Secondary structure LLHHHHHHHHHHHHHHLLLLEEEELLLLLLLLLLLLLLLLLHHHHHHHHLLLLLEEEELL
LLLLLLLLLLLLLLL
PRMN -
PiMo -