NONHSAT003015
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT003015 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
925 nt |
Genomic location |
chr1-:46912474..46913704 |
Exon number |
2 |
Exons |
46912474..46912817,46913124..46913704 |
Genome context |
|
Sequence |
000001 ATCAGAATTC AAGACCCCCT TCCCGTAACG TCCTAGTCAG GGCCCTTAGT CCCAGCTTTT CTAGAGCCCC TCACCCTGGG 000080
000081 AATGCTCCTG TTTCTCAGCT AAATTCCTCC GCTGGAGTGA CCCACCCTGT TGCTCTCTCA CAGGCACCCG CATGAGGGGC 000160 000161 TGGCTCCTCC CCGTGAATTC TGGGCACAGA CACCCAGACC TGAGCAGGCC CCTCACCCCA CAGCGACTGG GGAGCCGGAG 000240 000241 CCCGAGTCCC TCCCACCTGC TCCCTCGGTT TCTGAGGGTC TGTCTCATCC TGCAGCTGGA CAGACGTGAT CTTCAGCCCC 000320 000321 AAGTTacaga cgcttagaga agctggagac ttgcacaatg tctcagagga aagagagcca gaacctggac ccgtgttgta 000400 000401 ccccaaCCAA ACCCTCCATG GTGGAAGGAA TAGGAGTGGG AAGGGGAGGA GGAGACATAT GGTCCAGGAG GTTCCATATG 000480 000481 TACCCACACA TGGACCTCAA AGAGGCCCCC ACAGCAAGAC AGCAAATGAC ATCCACAGTC ACAGATCACG GAGTGATTTC 000560 000561 AGATGAAGAT GGTGCTGGCA GTTTCCCCAT CAGCGCAATG GAGTTTGAGC AAAGGATCTC ACTGGAGAAG TCGCAGCGAC 000640 000641 AGTGGATCTA AGAGCAGAGG GCAAGGGCTG CCTGAGCCTT GTGAAGCTCA ATTCTGCCCC CTGGTGCCCA GAATGCCGCG 000720 000721 CCAGCAATGG GATGCAGGAA GAAGAGGCAG GAGACACCTG AGGTCTCTTA CCTTTTCCAA GCTACTCAGA CCTCCCTCTT 000800 000801 ACAGGGCAGG GAACACAGGG CACCAGCCCT ACTAACCCAA TCTGAGGGGA AACTCTGAGG CTCCCTCTCC TGCAGAGATC 000880 000881 TCAGACTCTG TGGTAGAGTT GGTGTGGGGG GACACGTGAC GTCAG |
Predicted Small Protein
Name | NONHSAT003015_smProtein_458:565 |
Length | 36 |
Molecular weight | 4025.3893 |
Aromaticity | 0.0571428571429 |
Instability index | 58.32 |
Isoelectric point | 9.96917724609 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.0381734675852 |
Amino acid sequence | MVQEVPYVPTHGPQRGPHSKTANDIHSHRSRSDFR |
Secondary structure | LEEEELLLLLLLLLLLLLLLLLLHHHLLLLLLLLL |
PRMN | - |
PiMo | - |