NONHSAT003165
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT003165 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
653 nt |
Genomic location |
chr1-:50864497..50865445 |
Exon number |
2 |
Exons |
50864497..50865022,50865319..50865445 |
Genome context |
|
Sequence |
000001 ATGGGCAAAG GAGATCCTAA GAAGCCAAGA GGCAAAATGT TATCATATGC ATTTCTTGTG AAAACTTGTC AGAAGGAGCA 000080
000081 TAAGAAGCTT CAGTCAACTT CTCAGAGTTT TCTAAGAAGT GCTCAGAaaa aaaGTGCTCA GTGAGGTGGA AGACCATATC 000160 000161 TGCTAAACAG AAAGGAAAAT CTGAAGATAT GGCAAAGGCA AACAAGGCCC GTTATGAAAG AGAAATGAAA ATCTATATCC 000240 000241 CCCCTAAAGG GGAGACAAAA AAGAAGTTCA AGTCCAATGC ACCCAAGTGG CCTCCTGCAG CCTGTTTCGT GTTCTGTTCT 000320 000321 GAGTGTTGCC CCAAATCAAA GAACATCTTG GCCTGTCCAT TGGTGATGTT GCAAAGAAAC TGGGAGACAT GTGGAATAGC 000400 000401 ACTGCTGCAG ATGACAAGCA GCCTTATGAA AAGACAGCTG TGAAGCTGAA GGAAAAATAC AAAAAGGATC TTGCTGCATA 000480 000481 TTGAACTAAA GGAAAGCCTG ATGCAGCAAA AAAGGGAGTC ATCAAGGCTG AAAAAAGCAa gaagaagaag gaaggggagg 000560 000561 aagatgaaga ggatcaggag gaggaggaag aTGAAGGTGA AGAAAATGAT GATGAATAAG TTGATTCTAG TGCAGTTTTT 000640 000641 TTTTCTTGTC TAA |
Predicted Small Protein
Name | NONHSAT003165_smProtein_188:442 |
Length | 85 |
Molecular weight | 9626.5447 |
Aromaticity | 0.0833333333333 |
Instability index | 61.6988095238 |
Isoelectric point | 9.73333740234 |
Runs | 14 |
Runs residual | 0.0326812253564 |
Runs probability | 0.0490826961416 |
Amino acid sequence | MAKANKARYEREMKIYIPPKGETKKKFKSNAPKWPPAACFVFCSECCPKSKNILACPLVM LQRNWETCGIALLQMTSSLMKRQL |
Secondary structure | LLHHHHHHHHHHHHEEELLLLLHHHHHHLLLLLLLLLEEEEELLLLLLLLLLEEELLHHH HHLLHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |