NONHSAT003408

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT003408

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1811 nt

Genomic location

chr1+:55681081..55683134

Exon number

2

Exons

55681081..55681423,55681674..55683134

Genome context

Sequence
000001 GCTCCCGGAA GCGGCACGGG AGGCGACCGT GCTCGCCGTT GGCAGGCTAG GGTTGGCGGC GGCGTATTCT GTTTGTTTTA 000080
000081 AACGAAGGAG CGGAGGGAGG GGCCGCGCCG CGGAGCGTGC CTAAGGTGAA AGGGCTGCCG TGCAGCCAGG CAGAGGCGAG 000160
000161 GAAGGCTTCT CCATCGTCGC CACCGCCCGC CTGTTTCGCC GGCAACAGGT TCCCCCGGGA CGGGAGGGGC CGCAGCGCCG 000240
000241 CGCAGCTCGC AGCGCTGAAC GTCGCCGAAA TCCCTTGGCC GGCCGAGCCT CCGCAGCCGC GACCCGGCTT CTCTCCGTCC 000320
000321 GAGTCCCCCG AGCCTCTCCG AACCCCCGCC AGCCCTTGCC GAAACCACCC TAAACCCGTT GAAATTAATT CCCAGCTGTC 000400
000401 CGAATTTTCC TTCCAACATT AACTGACTAC CTGTCTCCGC CAAGCTGACT GAACTCTACC GAACTCTTAC CCTGAAAGCC 000480
000481 CCTGAGAGTC CAAAATATAT TTTTCCAGCC CGAAATCTAA ATCCCAGTTC TCTGTATGAA AACCTCCAGA AACCCAGACT 000560
000561 CTTACTTCCT TCGGCCACGG ACTCGTTCGA ACATCGTGGA CATCACCTTC CCACTTTTTT ACCGCAGTCT TTGGCTCCGA 000640
000641 TTCTTTGTCC CTGCCTCTTG GGCAGCATCC TATCCCTGTT TCTTTCCACC TTTGAGGATT CCTCTACCTC TTTAAAGGCC 000720
000721 TGCTTTCTTT GCTTTCTCTT CTCACCTTTG GCATTGGCAC ACTGGGGTCA TATCTTTAGT TCCCTTGACT CCACCATCTA 000800
000801 AGCCAAGGGT GTCCAATCTT TTGGCTTCCC TGGGCTACAT TGGAAGGAGA AAAATTGTCT TGGACCACAT ATAAAATATT 000880
000881 CTAACGCTAA TGGTAGCTGA TGAAACTTTT AAAAAATCTC ATCATGTTTT AAGAAGTTTA CGAATTTGTG CTGAGCCGCA 000960
000961 TTCAAAGCCG TCCTGGGCCT AAGTCCTTGC TATTTTTCCT CTTCAATTTC CTTCAATCCA TAGTTCTCTA GGTTATTTTC 001040
001041 CCACCCTTTC CCAAGATTCG GATATCCCTT CATTCTTGCT GAGTTCATCT CCTATGCCTA TTCCTACATA CTTGCTGAGT 001120
001121 TCATCTTCTA ATGTCCTCAT CCTGGTTTCT TCCTGAACCT GAAATCCAGC TAACCTTACT TTTTCATCCC ATCAAACCCC 001200
001201 TGCTGTTGCC AGCCCAGCAC TCACGAAGAT CTTTACATAC ACCAAATATT AAATTAGGGC CGGTACCTAG ACATTGTCTC 001280
001281 TGCACTCTGC TGGCATATTT TCCCCTGGAC CACGAACCCT TCGTACCTAG TAACTTGCCA CCTGTGTTTA TAAATACCAG 001360
001361 CAATTTGATT TACAGGGTGA ATTTGTCACT ATTGTTTACT TTTAAATGAA GTTACTGTAT TTGTTGTTTC CATTAAAGGC 001440
001441 GACATTATAA AGCCTAGGCC TCATATCCAA AGCAAATAAA GTCTCAATTT TTTAATTAAA AGTAACAAAA GGAAACCTCA 001520
001521 CACTTCTGAA CAACAATGAC AAGAAGGAAT GCCTATAATT GGTTTGGGTC ACAATGTACA TATTGAAATA AAATTTTTAT 001600
001601 TAAGTATCAA CTTCCAGGTA CACAATGAAG TTTTAAATGT TTATCTGTGA CATATGAAGA ACAAAGCAAT CTAAACTGAT 001680
001681 GTAAGCAGGC TGTCATAAGG TACATGCTGA GGAATTTATT CAACAAATTG AATAAATTTA TTCAATAAAT AAATAATTAT 001760
001761 TCAATAAATA ATATATTTAA TAAATTTAAT AAATAGAAAA AAAAAAAAAA A
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Predicted Small Protein

Name NONHSAT003408_smProtein_1130:1408
Length 93
Molecular weight 10585.4184
Aromaticity 0.108695652174
Instability index 71.0434782609
Isoelectric point 9.23675537109
Runs 12
Runs residual 0.00477009696591
Runs probability 0.0382294058765
Amino acid sequence MSSSWFLPEPEIQLTLLFHPIKPLLLPAQHSRRSLHTPNIKLGPVPRHCLCTLLAYFPLD
HEPFVPSNLPPVFINTSNLIYRVNLSLLFTFK
Secondary structure LLLLLLLLLLHHHEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLL
LLLLLLLLLLLEEEELLLEEEEELLEEEEEEL
PRMN -
PiMo -