NONHSAT006172

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT006172

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1613 nt

Genomic location

chr1+:149230538..149232583

Exon number

4

Exons

149230538..149230773,149230786..149230948,149231281..149231449,149231539..149232583

Genome context

Sequence
000001 CAATGCGTGA ATGCTTTAAA AGTTGCAATC Agcgtccctg gatgggctcg aaccaccaac ctttcggtta acagccgaac 000080
000081 gcgctaaccc attgcgccac agagacAAGC ACTACCAGTT CTAATAGGCA ATATAGGAAG GGCACACTCA CTAAACTTCC 000160
000161 TCCGTCCCTT CTATTCTCAG CGCCCGCCTG GCAGGACGAC TGAGCAAGGC TTTGGAAAAC CAGAGAGATT AGAGCGGGTC 000240
000241 ACATTGGATA CCTGCGCGTT AGGAGATTCT GGAGCCAGAC GGAGAGCCGA ATGGCCTTCG CCCGCCCTGC CCCTCTCTTG 000320
000321 CTTCAGAAGC CCCCAGAAAC TCCGCGGTCG GCGACCCAGC CCGAGCCGCC TGAGGTCCCA AGGGGAAGCT GAACGCCTGC 000400
000401 ATTGATTTCT CGGCACCCCG CGGGGCGTGC AACTGGCAGG GCCTCTGGTG GGCTTTCTGC CGGGTGGAGC TGCGGGGGCT 000480
000481 CAGCTGGGCG GGGGTCGGTT CCTGGGGCCG TAGGGTGGGA GCGGGGGAAG GGAAAAGCAA AAGCTGGGAA AGAAGCCAGG 000560
000561 GAGACATGGC AGAATGGGGA AATGGAGAGA GAACCTGAAA GAGCCCCAAA CTCGAGGACC TATTGCTCCC CAAGAATAAC 000640
000641 ATCTTCCAGA ACTAGACAGA AACTAAGCGT CTGGAAACCC TGAAATCCTT GGAGGAGTAG CATCATCCTG ACCCTCTGTG 000720
000721 CTCCTTTTGG CAAAGGACTT GCTTCCATTG TTTGTTTGTT CAATTGTCTG TTTGTTAAAT AAATAAAACT CTTTTCATAT 000800
000801 ATCTTTAAAA Gtacgttggt tctattattt tatgattaca aacaatgctg cagtcatcat tcttctacac ttgtcattgg 000880
000881 ccactggtat atttccatag ggtggaggcc tggagagcag ttgttCCAGC ATAGTGCTTA CATAGatttt atttcattcc 000960
000961 gttttctttc ctttgttgct ttattagcta taaccctttt cttatttcag tggctgcttt agggtttctg ggatatgtct 001040
001041 ttaatttatc acagtctgct ttcaggtgtc attatgtctc cctttctggc ctttatccta gtgttatgta attttacttt 001120
001121 atacattata atccttgtga ttcattatta ttacttttat ttattacacc aaatattttt taaaagattt aaattctaag 001200
001201 aaaatgtgta gtacatgctt tctaaatgcc atttccagta ttcgtttctt tgtataggcc cacattttta tctggtatcc 001280
001281 ttttgcctct gcctggagga cttttaataa gatttcttgt aacgtgggtt ggtgaattgt tttagctttt gtatgttttt 001360
001361 cgatgtcctt atttcactca cagttttgaa attttatttt tgcatagaat tccaggttaa ctttttttct ctgGGTACTT 001440
001441 TAAAAATGTT ACCATTTATG AAGCATTGCC ATTATAATAT CATCTTTCTT TCCTGTGTTT GTAAGAATGG CATAAAGCCG 001520
001521 GTTTCTTGCG GTGGTTATAT AATTTTCAGA ATGTGTACtt aaatttaaaa tattaaattt tactaaaata ctaaaaatat 001600
001601 taatCATGAA CAT
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Predicted Small Protein

Name NONHSAT006172_smProtein_1352:1561
Length 70
Molecular weight 8062.7964
Aromaticity 0.188405797101
Instability index 54.2407246377
Isoelectric point 8.85003662109
Runs 17
Runs residual 0.107045487157
Runs probability 0.0387013310889
Amino acid sequence MFFDVLISLTVLKFYFCIEFQVNFFSLGTLKMLPFMKHCHYNIIFLSCVCKNGIKPVSCG
GYIIFRMCT
Secondary structure LLEEEEEEELLLEEEEEEEEEELEELLLHHHHLHHHHHLLLLEEEEEEEELLLLEEEELL
LEEEEEEEL
PRMN LLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLL
LLLLLLLLL
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