NONHSAT007001

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT007001

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2520 nt

Genomic location

chr1-:159169452..159172599

Exon number

2

Exons

159169452..159171411,159172040..159172599

Genome context

Sequence
000001 GTGGTGCCCA AGGCCCTAAC CAGCGGCTGG AAGATTCACA ACTGTATTAC CTGAACTGAA GGGGGTGGGC AGGCCTGCTA 000080
000081 GATTGCAGCT GCCCCTTTTT GCATGCCCAT TGTCAGACCA GGGAGGAAAA GCTGGGGGAG GGTGGGAGCG ATGCCAAGGG 000160
000161 CATCCTGGAT CTGAGGCGGG GCAGTCCAGC CAGGACAGGG AGGACCAGGA ACCTCATCTC CACAGCAACC AGCTGGGGCC 000240
000241 ACGAGAAGGA AGACAGGAAA TCAAAAGGAA GGGTGGGGAC CCAGCCTTCA ACTCACTGGG TACAGACTAT GGGAAAAAAT 000320
000321 AGGTGGTGGT AGGTCTTTCC AGGGTCAACG CCAAGGAGAG GCCTGAGAGG TGCATAGCAA AGGCTGTGGC ACTGACTCCA 000400
000401 TGGCTCAGAG GAGGGAAATC CAGGGAAGGG CTGAATGCTC TGTGTTTAAG GGAGAGATAG AATGGACAGC TGGGCAAACA 000480
000481 CACACCCGGG GACTCCTTTC TCCAAGACCG ATGGGCATTG GGGGTGGCAG AGGAAATACC AGCATGGAAC AACATCCCAG 000560
000561 GGACCCGCGT CCTCCCCAGG TTACAGTCCT GGGTCCCTGC ATGGCTGCAT GTTGTCTGCA GGCCACATCT CCTCAGGACT 000640
000641 CCCGCACTCA TCACTTTCCC ATTGCTATGG AAGAGAGGTG TCAAGGTGGC ACCTGCCTCC CTGTCCGTAG TGCTCAGGTG 000720
000721 TGTGGCTACC AGAGGAAAAG CCACTCCCAA CCTTTGCCGA CAACCATCCC GTTTCTGGGT TCCTGGAGAA GTCTGGGAAG 000800
000801 CTGCTCTGTT GTAGAGGCTG AAAGGAGGGC TGGTGAGAGC CCCCAGCTGA AACCAGCCCT GCCCCTTACC CTTCCTCACC 000880
000881 CCTCTACCTT CACTCTCCTC CTAACACTCC AGGGTTTTGT TTTTTGTTTG TTTTTTGCTT TTCTCACCCC AGGGCTCCTG 000960
000961 CCTCTCCAGC CTGGAGACAG ATTTGATTTG GGATTGTTAC AAAAATAATA ATAACCCAAA TGCAGAGAAG CCACGGAAAG 001040
001041 GGCTGAGGGC AACCCTCCCC TCCCCCCGCC CTCCTCCCTC CCCATTCCAA ACCGAGTACA AAACCGCACC CAAAGCAGAC 001120
001121 ATTCTGTACA GGGGGGTGGG TGGGCTGGGG AGCAAGCGGG AGGGGCGGCC CTGCGGTTGC TCTGTACAAG TCCGGGTTGG 001200
001201 TGACGGCCCC AGCAGTCCCC ACAGGGCCCC TGGGGGGCGC AGGAAGTGGG CAGGCGCCTC TAGATGAAAT ATTCCTTCTT 001280
001281 GTCGTCCCCT CCTGACTGCC CGCCTTCTGC ATTGATGATG GCCGTGTCCG CGTCTGGAGC ATCGTCGGAG CCTTTTGCCT 001360
001361 CATGTGTCAG GTAGGTTCCT GTGTAGAGAC AGAGGCTTCT CCTCTCAGGA GCAGCTTCCC AACCTCTGAG TCCACCCTGC 001440
001441 CCACTTTCTC ACCCACCCAC TCACACACTG CTCAAGTAAT TTTTCTCTTG CCAATAGCTC TCTTCTACTC CACCTTACCT 001520
001521 AATTCGCATT TTGCTTCCAA CATGCCTCAC CTGACCACAC CCTTCATGAA TAATGAATCC TACCCCTAAG TAGAATCTCA 001600
001601 TCTATAATAC AAAGCAAGAA AGAGAAgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgcttgcac gcatgcgtgt 001680
001681 gtgtgtgtat gcatgcgtgt gCACGCAACT TGGTGACGGG GGATCTGCTA TGTCAGCTTC ATGAGCAAAG CAATTGAGAT 001760
001761 CTGGCTTATG TATGACCAGC CTATGGAGTC AGGCCGCTGG CTAGAATTAA TAGCAGAGCA GGAAGTCTga gaggaaggaa 001840
001841 tgtgagaaga gggtagagag aaggcatgga tataagagag aaggtagaaa agggggagag gaaagaaagg caatgagatc 001920
001921 aaaggagaaa gaaaatgagg ttaaacagac agaaaggaag aaagCGCAGG AAGCAATGAG ATGGAGATGC AGTTTCAGGA 002000
002001 GCTCTCTGTC TTGCAGCAGG AGACCTGGAG GTAGAGCAGC ATGGGAGCAA CCGCTGACTG AGTGGGAAGG TTTGATTTCA 002080
002081 CTTGGACGAT CCCCAAGTGA TCAGGCTTTA CTGCGGGGTT GGTGGTGCTC AGTTATCACA GGGTTGGCAA TGATAGGGTT 002160
002161 GGCTCCATTT TTAATTCCCT AAACACTCCA AAGGGCTGAC AAGTCTCTGA AGGCCCTTTC CACTGTCTGC TTCTCCTCGT 002240
002241 GCCTGCCTCT GATTGGTCTC CCTGCCCCTC CCAAGTTCTG CTGATGCTCT CTTTGTGCCT CTGACCTTTG TGCCGGATCA 002320
002321 AGTAGTGGCC AAGGAAGATG AGCATGATGA GCAGCAGGAA GACAATGAAA GCCACGATCC CACCGATGAT GGCGTGGTAG 002400
002401 GTGCTGGAGG AGGAGGGCAC CGGACTGGGG TCTGGAAGAA AGGGCAACAC ACACAGTCAG ATCTGGGGAG AGCCCTTATC 002480
002481 TTATAGCATT CCAACTTGGC CATGAATAGT CTTACACAGC
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Predicted Small Protein

Name NONHSAT007001_smProtein_461:709
Length 83
Molecular weight 8868.6772
Aromaticity 0.0975609756098
Instability index 57.0670731707
Isoelectric point 8.59844970703
Runs 10
Runs residual 0.0139504804139
Runs probability 0.0223812047342
Amino acid sequence MDSWANTHPGTPFSKTDGHWGWQRKYQHGTTSQGPASSPGYSPGSLHGCMLSAGHISSGL
PHSSLSHCYGREVSRWHLPPCP
Secondary structure LLLLLLLLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLLHHHEELLLLEELLLL
LLLLLLLLLLLEEEEEELLLLL
PRMN -
PiMo -