NONHSAT007135
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007135 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
680 nt |
Genomic location |
chr1-:161145598..161147287 |
Exon number |
4 |
Exons |
161145598..161145864,161146224..161146369,161146702..161146893,161147213..161147287 |
Genome context |
|
Sequence |
000001 CCCGCTTCCA AGATGGCGGC AGCGATGCCT GCCCGGCTGT TGGGGTGGCG GTGACGACAG GCAGCAAAAG ACCAGTAACC 000080
000081 CTCCTCCCCA CCCCCGCTAG AAGAGGGGAA AGGTAGAAAA GGTAGAGGAC GCCACCCCCA CCCTACTCTC CGCCGAGCTC 000160 000161 CGGGGCTGTT CGCTTACAGC CCCCAGGTGG TCACGGTCCC TGCACCTGAG GAGTTGGCAC CCAGGCACAT GAAGAATAGA 000240 000241 AGGAGCCTGT TTCCTACTTC GCCCTGGCTG GTCCCAGATT CGCTGCTGGA GTGCTGGATG GAGCCTTTCT CTGCCCTCTG 000320 000321 TGACATTTCC AATTTTAGAT AATGCCTCAC ATCTCTGTCC CCCCGGGACC CCCTGGAGCC CCCATGATCC CTAAGAAGAC 000400 000401 AGCTTGAACC TAGATCTCAC CCCCAGGATG TTGCGGAGGC TGCTGGAGCG GCCTTGCACG CTGGCCCTGC TTGTGGGCTC 000480 000481 CCAGCTGGCT GTCATGATGT ACCTGTCACT GGGGGGCTTC CGAAGTCTCA GTGCCCTATT TGGCCGAGAT CAGGGACCGA 000560 000561 CATTTGACTA TTCTCACCCT CGTGATGTCT ACAGTAACCT CAGTCACCTG CCTGGGGCCC CAGGGGGTCC TCCAGCTCCT 000640 000641 CAAGGTCTGC CCTACTGTCC AGAACGATCT CCTCTCTTAG |
Predicted Small Protein
Name | NONHSAT007135_smProtein_584:679 |
Length | 32 |
Molecular weight | 3245.8281 |
Aromaticity | 0.0 |
Instability index | 42.0516129032 |
Isoelectric point | 5.58294677734 |
Runs | 7 |
Runs residual | 0.0245295698925 |
Runs probability | 0.0383955383955 |
Amino acid sequence | MSTVTSVTCLGPQGVLQLLKVCPTVQNDLLS |
Secondary structure | LLEEEEEEELLLHHHHLHHHHLLLLLLLLLL |
PRMN | - |
PiMo | - |